Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3103
Parameters: 2 7 7 80 10 50 1000
Length:  51002

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7105--7280
46
3.8
46
77
14
200
20
19
30
29
1.97
7102--7273
93
1.8
93
93
2
301
20
20
30
28
1.98
8616--8901
27
10.6
27
83
0
331
40
18
8
32
1.81
8616--8901
54
5.3
54
87
0
385
40
18
8
32
1.81
8616--9012
27
14.7
27
78
3
316
38
19
9
32
1.83
9001--9293
27
10.9
27
89
0
390
36
18
21
23
1.95
8994--9298
81
3.8
81
88
1
441
36
19
20
23
1.95
9523--9678
67
2.3
67
89
0
240
19
27
21
31
1.97
9801--9872
6
11.8
6
73
19
60
19
13
16
50
1.79
9778--9855
31
2.5
31
91
2
120
19
14
14
52
1.74
14889--14998
40
2.8
40
86
6
145
22
28
24
24
2.00
22469--22578
40
2.8
41
82
6
129
23
27
23
25
2.00
25858--25888
13
2.4
13
88
0
53
51
9
0
38
1.35
26840--26917
38
2.0
40
87
7
115
33
25
20
20
1.97
26841--26931
38
2.3
39
83
9
105
35
26
19
18
1.95
28817--28915
42
2.3
42
84
5
128
33
25
17
24
1.96
28817--28962
42
3.4
41
79
12
127
34
26
15
23
1.95
28793--28962
43
4.0
42
78
9
137
34
26
15
23
1.95
35568--35597
15
2.0
15
100
0
60
40
13
13
33
1.83
37569--37660
47
2.0
47
89
2
141
26
14
14
45
1.82
39514--39648
40
3.3
40
77
5
128
26
23
22
27
1.99
40001--40075
38
2.0
38
97
2
143
32
24
13
30
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46690--46857
40
4.2
40
83
4
106
25
27
23
23
2.00
46713--46857
40
3.6
40
85
4
193
23
26
24
25
2.00
47210--47285
38
2.0
38
97
0
143
31
25
13
30
1.93
48096--48357
45
5.9
45
86
2
325
23
20
29
27
1.99

Tables:   1

The End!