Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold415
Parameters: 2 7 7 80 10 50 1000
Length:  50751

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10603--10700
23
4.3
23
90
2
162
31
26
21
20
1.98
10610--10698
45
2.0
45
95
0
160
31
26
22
19
1.97
15326--15386
18
3.3
19
78
15
65
40
3
1
54
1.27
15326--15381
20
2.9
20
82
15
57
44
3
1
50
1.29
20849--20892
21
2.0
22
86
4
63
29
2
6
61
1.34
30229--30256
11
2.5
11
100
0
56
78
7
0
14
0.95
36671--36733
26
2.4
25
80
12
65
47
1
3
47
1.27
37009--37059
23
2.2
23
83
13
61
37
3
1
56
1.29
38498--38560
27
2.3
27
76
10
67
52
1
3
42
1.27
40164--40210
17
2.8
17
79
20
62
55
6
2
36
1.37
40668--40707
20
1.9
21
85
10
55
50
0
25
25
1.50
45681--45959
40
7.2
40
88
6
405
23
23
27
25
2.00
45681--45959
118
2.4
117
89
6
424
23
23
27
25
2.00
45681--45959
78
3.6
78
87
6
395
23
23
27
25
2.00

Tables:   1

The End!