Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1870
Parameters: 2 7 7 80 10 50 1000
Length:  48888

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7345--7376
12
2.7
12
100
0
64
81
6
0
12
0.87
17571--17614
21
2.0
22
86
4
63
34
34
6
25
1.82
22513--22683
93
1.8
93
89
0
270
28
30
19
21
1.97
22504--22679
46
3.8
46
74
7
158
29
30
19
20
1.97
24979--25028
15
3.4
15
86
2
66
60
12
18
10
1.59
24990--25037
15
3.2
15
79
5
53
56
14
16
12
1.68
27938--28066
46
2.8
46
92
0
213
27
30
23
18
1.98
30583--30616
12
2.8
12
81
0
50
44
0
38
17
1.49
35532--35581
18
2.8
18
87
0
64
76
6
14
4
1.13
35528--35581
6
9.2
6
77
2
56
75
5
14
3
1.12
35596--35663
30
2.4
29
80
11
79
67
0
17
14
1.23
37430--37483
20
2.7
20
82
0
63
24
20
18
37
1.94
37430--37503
30
2.5
30
86
8
98
21
20
18
39
1.93
37430--37494
20
3.2
20
71
16
53
23
21
16
38
1.93
39823--39865
17
2.5
17
75
14
52
23
27
9
39
1.85
40265--40361
30
3.2
30
76
2
106
27
16
27
27
1.97

Tables:   1

The End!