Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3088
Parameters: 2 7 7 80 10 50 1000
Length:  51473

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5940--5985
24
1.9
24
86
8
67
73
2
17
6
1.14
6576--6663
37
2.4
37
100
0
176
29
14
22
32
1.94
7262--7446
40
4.7
40
82
7
200
24
22
27
25
2.00
7262--7444
79
2.3
81
82
7
214
24
22
26
25
2.00
7353--7466
40
2.8
40
84
7
108
24
21
27
27
1.99
7315--7469
79
2.0
79
81
7
181
25
20
26
27
1.99
15663--15708
13
3.2
16
71
28
57
58
10
6
23
1.55
16835--16887
27
2.0
27
84
0
70
43
13
15
28
1.84
19065--19258
98
2.0
98
94
0
343
39
9
18
31
1.83
22447--22514
26
2.7
24
74
14
66
42
8
1
47
1.43
26307--26447
43
3.3
43
75
8
144
33
27
15
23
1.95
26326--26447
42
2.8
43
80
6
131
34
25
14
25
1.94
31585--31673
27
3.2
26
72
12
79
39
17
10
32
1.84
35929--36067
42
3.2
43
81
7
140
33
27
15
23
1.95

Tables:   1

The End!