Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3131
Parameters: 2 7 7 80 10 50 1000
Length:  48688

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1479--1662
40
4.6
40
82
6
196
23
20
27
28
1.99
1479--1659
80
2.3
81
83
9
221
23
20
27
27
1.99
1560--1709
40
3.8
38
80
10
131
25
22
28
24
1.99
9320--9503
40
4.6
40
82
6
196
23
20
27
28
1.99
9320--9500
80
2.3
81
83
9
221
23
20
27
27
1.99
9401--9550
40
3.8
38
80
10
131
25
22
28
24
1.99
19575--19880
53
5.6
54
80
9
363
23
24
17
33
1.96
19575--19872
108
2.7
108
92
1
488
23
24
18
33
1.97
24622--24723
39
2.6
39
83
10
127
25
12
25
36
1.91
24693--24809
41
2.8
42
80
6
132
22
15
29
33
1.94
25362--25387
13
2.0
13
100
0
52
38
0
15
46
1.46
32542--32659
43
2.8
42
77
7
139
22
16
27
32
1.96
36196--36347
27
5.6
27
93
3
241
30
28
13
26
1.94
36196--36347
55
2.8
55
94
0
259
30
28
13
26
1.94
44319--44468
27
5.6
27
86
9
135
30
30
13
26
1.94
44319--44468
53
2.8
55
85
8
209
30
30
13
26
1.94

Tables:   1

The End!