Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2481
Parameters: 2 7 7 80 10 50 1000
Length:  48173

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4038--4257
79
2.8
80
79
11
238
25
27
21
25
1.99
4038--4257
40
5.6
40
81
7
236
25
27
21
25
1.99
6981--7204
40
5.7
40
86
6
278
25
27
22
24
2.00
6983--7204
118
1.9
119
84
6
299
25
27
22
24
2.00
8330--8449
56
2.1
56
96
0
222
22
23
8
45
1.79
14240--14422
79
2.3
81
84
7
232
25
27
22
24
2.00
14219--14422
40
5.1
40
82
8
238
25
27
22
24
2.00
34525--34582
30
2.0
30
82
3
73
43
10
10
36
1.73
38589--38956
103
3.6
102
92
2
587
30
29
19
19
1.97
38827--38878
26
2.0
26
96
0
95
28
34
23
13
1.92
46478--46834
100
3.6
101
84
10
400
19
20
28
31
1.97
46478--46834
97
3.6
99
82
12
396
19
20
28
31
1.97

Tables:   1

The End!