Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2342
Parameters: 2 7 7 80 10 50 1000
Length:  51282

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3881--4002
28
4.4
28
89
3
167
33
28
11
26
1.91
12025--12092
29
2.3
29
82
5
84
27
29
13
29
1.94
12201--12272
29
2.5
29
81
0
90
30
30
12
26
1.93
11915--12266
174
2.0
173
92
1
589
31
25
13
29
1.94
15426--15611
27
6.9
27
83
2
230
34
18
22
24
1.96
15747--15830
27
3.1
27
80
6
82
20
22
22
34
1.97
18301--18383
43
1.9
43
95
0
148
36
7
10
45
1.67
18685--18730
23
2.0
23
100
0
92
30
13
17
39
1.87
21203--21269
28
2.3
29
87
2
100
29
31
13
25
1.94
21492--21522
8
3.9
8
95
0
53
12
19
29
38
1.89
24624--24855
43
5.4
43
91
1
342
29
33
23
13
1.93
24827--24910
38
2.2
38
82
4
107
30
26
22
20
1.98
32442--32662
40
5.6
40
79
7
202
24
21
26
27
1.99
39681--39748
29
2.3
29
85
5
93
27
30
13
27
1.94
39570--39898
175
1.9
174
96
0
613
30
24
14
30
1.95
39851--39929
29
2.7
30
82
13
110
29
30
15
25
1.96

Tables:   1

The End!