Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1200
Parameters: 2 7 7 80 10 50 1000
Length:  44661

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4048--4461
47
8.7
47
96
1
706
32
8
29
29
1.87
4069--4461
192
2.1
189
95
2
709
32
8
29
29
1.87
4580--4657
36
2.1
37
90
2
122
24
19
30
25
1.98
5870--6137
78
3.4
80
92
3
436
24
22
27
25
1.99
5870--6137
40
6.8
40
91
3
436
24
22
27
25
1.99
10052--10449
49
8.3
49
94
2
668
33
8
28
30
1.86
10568--10646
37
2.1
37
83
0
104
24
15
30
30
1.95
16388--16506
28
4.2
28
81
3
132
27
14
33
24
1.94
16388--16506
56
2.1
57
85
4
161
27
14
33
24
1.94
16513--16564
27
1.9
27
92
0
86
21
1
32
44
1.63
20834--21009
46
3.8
46
76
12
171
29
28
20
21
1.98
20885--21028
46
3.1
44
72
15
114
29
28
19
22
1.98
24667--24914
27
9.2
27
87
0
343
33
19
22
24
1.97
25057--25143
27
3.2
27
78
0
93
20
20
20
37
1.94
25327--25433
33
3.2
33
94
0
187
28
18
27
25
1.98
33449--33508
30
2.0
30
90
0
93
38
8
25
28
1.84
37059--37177
39
3.1
39
86
4
159
26
23
21
27
1.99
37086--37202
39
3.0
38
81
6
101
26
21
22
29
1.99

Tables:   1

The End!