Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold654
Parameters: 2 7 7 80 10 50 1000
Length:  44394

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2589--2760
43
3.8
43
78
11
184
21
20
29
28
1.98
5645--5724
15
5.4
15
77
7
83
10
18
13
57
1.64
5636--5723
30
3.0
30
80
11
92
10
18
15
55
1.68
8081--8251
92
1.8
93
91
1
281
21
20
30
27
1.98
13687--13721
16
2.2
16
89
0
52
8
14
22
54
1.67
19848--19912
20
3.3
19
73
16
51
38
16
21
23
1.93
21687--21749
33
1.9
33
84
12
85
12
25
6
55
1.60
21747--21802
21
2.7
21
72
5
51
8
17
1
71
1.21
21746--21871
28
4.6
26
68
20
78
8
18
3
69
1.27
21746--21802
14
4.1
14
75
16
57
8
17
1
71
1.19
21809--21859
18
2.9
18
82
2
68
5
15
5
72
1.24
21764--21859
6
15.7
6
68
6
59
7
18
3
70
1.24
22909--22950
12
3.6
12
90
3
59
9
2
7
80
0.97
24455--24502
20
2.4
20
67
0
51
33
18
27
20
1.96
29421--29583
42
3.9
41
75
7
130
28
25
15
29
1.96
30470--30519
26
1.9
26
87
0
73
44
24
18
14
1.86
30517--30598
27
3.1
27
74
8
78
36
18
19
25
1.94
30724--30795
27
2.7
27
84
0
81
20
16
22
40
1.91
33025--33199
46
3.8
45
74
15
169
21
19
28
30
1.97
33022--33191
93
1.8
93
89
2
270
21
19
28
30
1.97
41139--41311
46
3.8
46
75
16
173
20
19
30
29
1.97
44225--44262
14
2.6
15
87
8
60
13
18
10
57
1.63

Tables:   1

The End!