Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold542
Parameters: 2 7 7 80 10 50 1000
Length:  42118

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
502--556
19
2.9
19
81
13
60
29
5
1
63
1.27
6013--6095
38
2.2
37
85
10
107
3
32
0
63
1.11
7687--7798
27
4.2
26
82
7
98
16
23
22
38
1.93
7690--7796
54
2.0
54
83
3
135
16
23
20
39
1.92
11115--11280
38
4.3
38
93
3
262
21
19
24
34
1.96
18717--18882
38
4.3
38
96
1
296
21
20
25
32
1.98
19239--19332
46
2.0
46
100
0
188
32
17
13
36
1.89
26645--26689
21
2.1
21
88
8
65
55
2
17
24
1.53
27117--27155
21
1.9
20
84
5
51
56
5
5
33
1.43
34377--34469
45
2.0
46
97
2
179
36
13
17
32
1.89
34826--34991
38
4.3
38
94
1
287
33
25
19
21
1.97
40214--40379
38
4.3
38
93
3
262
34
24
19
21
1.96

Tables:   1

The End!