Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1367
Parameters: 2 7 7 80 10 50 1000
Length:  50830

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3205--3387
39
4.6
39
86
3
188
25
20
28
26
1.99
3166--3387
40
5.6
40
83
4
227
24
20
28
26
1.99
3166--3385
79
2.8
78
83
3
233
25
20
28
25
1.99
3241--3422
79
2.3
79
80
2
206
25
20
28
25
1.99
13157--13215
10
6.3
9
79
13
66
62
1
1
33
1.15
19410--19464
24
2.2
26
81
12
71
45
0
1
52
1.11
19602--19696
45
2.1
45
88
1
138
32
27
5
34
1.79
19677--19744
16
4.2
16
96
0
118
35
36
0
27
1.58
24023--24077
27
2.0
28
85
3
76
25
23
30
20
1.98
28008--28082
37
2.0
37
100
0
150
36
8
24
32
1.84
40694--40956
40
6.6
40
87
3
316
24
20
28
26
1.99
40733--40991
80
3.3
80
84
3
238
25
20
28
25
1.99
48619--48876
40
6.6
39
84
6
272
24
19
28
27
1.99
48657--48876
78
2.8
77
86
4
298
25
19
28
26
1.99

Tables:   1

The End!