Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3709
Parameters: 2 7 7 80 10 50 1000
Length:  38999

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
479--884
46
8.5
47
86
8
534
30
29
8
31
1.88
532--876
193
1.8
187
90
6
559
31
28
8
31
1.87
5219--5458
40
6.0
40
92
0
363
24
27
22
25
1.99
7431--7924
47
10.6
47
94
1
814
28
29
8
32
1.87
8149--8251
40
2.6
40
80
9
120
25
28
22
24
1.99
13454--13628
46
3.8
46
76
13
196
29
29
20
21
1.98
13461--13632
93
1.8
93
93
0
299
28
29
20
21
1.98
13457--13648
46
4.2
46
71
16
137
29
28
20
22
1.98
14051--14108
30
1.9
31
85
3
82
25
22
6
44
1.77
15444--15635
64
3.0
64
93
1
323
31
17
13
36
1.89
15811--16646
177
4.7
177
80
4
565
30
18
23
27
1.98
16020--16641
176
3.5
176
85
2
804
30
16
24
28
1.97
16422--16910
266
1.8
265
80
4
583
30
16
23
29
1.96
21685--21944
46
5.7
46
70
15
200
23
20
27
29
1.99
21680--21939
93
2.9
92
88
3
377
23
20
28
28
1.99
28639--28741
42
2.5
42
87
3
145
29
16
23
31
1.96
30974--31156
79
2.3
81
84
7
232
25
27
22
24
2.00
30953--31156
40
5.1
40
82
8
238
25
27
22
24
2.00

Tables:   1

The End!