Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1511
Parameters: 2 7 7 80 10 50 1000
Length:  37337

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12472--12643
93
1.8
93
96
0
317
27
29
21
20
1.98
12465--12640
46
3.8
46
79
12
216
28
29
21
20
1.98
19520--19690
92
1.8
93
93
1
299
28
29
21
21
1.98
19513--19687
46
3.8
46
77
14
198
29
29
20
20
1.98
23114--23214
29
3.5
29
84
2
123
28
30
14
25
1.95
23125--23237
29
3.9
29
85
1
102
28
30
15
26
1.96
23465--23499
16
2.2
16
94
0
61
5
20
17
57
1.60
23449--23499
24
2.1
24
85
7
68
7
17
17
56
1.63
25015--25055
18
2.2
19
83
12
50
14
39
26
19
1.90
27626--27726
29
3.5
29
84
2
123
27
30
14
26
1.95
27628--27745
29
4.1
29
85
2
112
27
29
16
27
1.97
28058--28229
93
1.8
93
94
0
308
28
29
20
20
1.98
28051--28226
46
3.8
46
79
12
207
29
29
20
20
1.98
28100--28238
47
3.0
46
75
14
151
29
29
18
22
1.97
35590--35761
93
1.8
93
95
2
310
28
29
20
20
1.98
35583--35758
46
3.8
46
79
14
209
29
29
20
20
1.98

Tables:   1

The End!