Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3117
Parameters: 2 7 7 80 10 50 1000
Length:  35931

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3556--4011
49
9.5
49
91
1
705
33
8
30
27
1.86
3748--3826
25
3.3
25
63
22
69
31
5
31
31
1.79
3556--4011
192
2.4
192
92
1
743
33
8
30
27
1.86
5587--5940
40
8.9
40
93
0
577
20
22
29
28
1.98
5952--6055
28
3.7
28
74
7
102
22
23
27
26
1.99
9061--9514
47
9.5
49
93
3
750
32
8
30
27
1.86
9253--9331
25
3.3
25
63
22
69
31
5
31
31
1.79
9061--9514
192
2.4
192
95
0
802
32
8
30
27
1.86
23563--23746
39
4.6
41
82
11
206
24
22
27
25
2.00
23563--23746
79
2.3
80
83
8
225
24
22
27
25
2.00
23616--23779
78
2.1
79
83
7
201
26
21
27
25
1.99
30398--30492
49
1.9
49
93
0
163
26
17
27
28
1.98
32838--32960
28
4.4
28
92
2
185
26
12
27
33
1.92
32863--32973
28
4.0
27
91
3
143
29
11
25
33
1.91

Tables:   1

The End!