Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3216
Parameters: 2 7 7 80 10 50 1000
Length:  34804

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1735--2096
48
7.6
48
73
8
213
29
17
27
24
1.98
1819--2091
96
2.9
94
83
4
316
28
19
27
24
1.98
1723--2099
143
2.6
141
80
6
384
29
18
27
24
1.98
6708--6746
13
3.0
13
92
0
60
20
20
38
20
1.94
9189--9557
96
3.9
95
74
6
273
23
30
18
27
1.98
9193--9567
48
7.8
48
74
4
229
23
30
18
27
1.98
10489--10538
23
2.2
23
100
0
100
20
18
16
46
1.85
11491--11767
48
5.8
48
75
1
234
24
27
20
27
1.99
11494--11767
143
1.9
144
80
5
322
24
27
20
27
1.99
11490--11810
48
6.7
47
72
5
207
24
27
19
27
1.99
15692--15769
37
2.1
36
86
6
104
25
29
20
24
1.99
15887--16507
47
13.4
47
93
2
986
29
29
8
32
1.87
15962--16036
22
3.3
22
63
7
60
28
30
10
30
1.90
15887--16507
93
6.7
94
92
2
986
29
29
8
32
1.87
15887--16508
232
2.7
231
90
2
980
29
29
8
32
1.87
19534--19573
13
3.0
13
88
3
53
20
20
37
22
1.94
22204--22333
48
2.8
48
80
2
138
21
31
20
26
1.98
23243--23290
22
2.2
23
92
7
82
18
18
16
45
1.85
28414--28491
37
2.1
36
86
6
104
25
30
17
25
1.97
28609--29232
47
13.4
47
92
2
956
29
29
8
33
1.86
28659--29230
236
2.5
234
92
2
965
30
28
7
33
1.85
34194--34668
90
5.2
89
77
19
407
32
8
28
29
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34194--34668
46
10.3
47
81
16
513
32
8
28
29
1.87

Tables:   1

The End!