Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3797
Parameters: 2 7 7 80 10 50 1000
Length:  92498

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1364--1588
40
5.7
40
82
6
233
25
28
21
25
1.99
1520--1597
40
1.9
41
82
10
97
26
28
20
24
1.99
8923--9147
40
5.7
40
81
6
224
24
28
21
25
1.99
9079--9156
40
1.9
41
81
5
95
25
28
21
24
1.99
16860--16952
42
2.2
42
82
1
114
29
17
20
33
1.95
35237--35657
177
2.4
177
89
4
643
31
17
24
26
1.97
35356--35640
43
6.5
42
69
18
170
29
17
25
27
1.98
41521--41583
10
5.9
10
85
7
72
58
3
0
38
1.14
41518--41576
12
5.2
12
83
8
72
55
3
0
40
1.16
50002--50175
46
3.8
45
75
13
156
22
21
27
28
1.99
65683--65865
39
4.7
40
81
11
184
24
23
27
24
2.00
65683--65865
79
2.3
79
82
9
214
24
23
27
24
2.00
65684--65865
40
4.6
39
80
11
194
24
23
27
24
2.00
65736--65888
77
2.0
78
82
10
188
26
22
26
24
2.00
65735--65899
78
2.1
79
80
9
187
26
21
26
24
2.00
67157--67278
65
2.0
59
90
9
190
11
24
28
35
1.90
73691--73875
40
4.7
40
78
7
166
26
23
25
24
2.00
73691--73908
79
2.7
79
80
8
221
27
22
25
23
2.00
75178--75303
65
1.9
66
95
1
227
11
23
30
34
1.90
77184--77228
22
2.0
22
83
8
56
37
4
2
55
1.32
81628--81789
42
3.9
42
81
3
184
30
12
24
32
1.93
83762--83939
27
6.6
27
84
3
205
29
28
15
26
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
83783--83938
82
1.9
81
88
3
233
29
28
15
26
1.96
91943--92120
27
6.6
27
84
3
205
29
28
15
26
1.96
91964--92119
82
1.9
81
88
3
233
29
28
15
26
1.96

Tables:   1

The End!