Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2120
Parameters: 2 7 7 80 10 50 1000
Length:  78107

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8419--8448
15
2.0
15
93
0
51
50
33
13
3
1.58
17353--17445
30
3.2
30
93
3
154
32
23
17
26
1.96
24691--24882
40
4.8
40
79
7
178
26
22
26
24
2.00
24744--24908
79
2.1
79
82
6
192
26
21
26
24
2.00
35140--35172
13
2.4
14
90
10
50
42
3
0
54
1.15
36517--36592
19
3.8
19
80
11
82
78
2
6
11
1.03
36529--36596
7
9.9
7
73
9
50
77
1
7
13
1.03
37220--37264
21
2.3
19
84
7
54
73
2
4
20
1.11
37228--37272
21
2.1
21
83
4
54
71
2
8
17
1.23
41638--41836
55
3.7
53
82
6
222
22
25
16
35
1.95
41638--41836
108
1.8
110
90
4
323
22
25
16
35
1.95
41591--41846
55
4.8
54
77
12
221
21
24
17
36
1.94
45927--45961
18
2.0
18
88
5
54
42
20
8
28
1.81
52267--52325
8
7.4
8
79
7
57
50
20
20
8
1.73
52267--52325
16
3.7
16
79
0
64
50
20
20
8
1.73
52267--52325
24
2.5
24
85
0
73
50
20
20
8
1.73
52535--52613
29
2.8
28
83
9
81
22
18
31
26
1.97
60267--60492
40
5.7
40
94
1
364
29
27
20
22
1.98
60231--60488
80
3.2
80
90
2
360
29
27
21
22
1.99
68450--68706
40
6.5
40
90
4
344
28
27
21
22
1.99
68485--68710
40
5.7
40
93
1
355
29
27
20
23
1.99
73515--73737
40
5.6
40
84
3
236
26
28
20
24
1.99

Tables:   1

The End!