Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2860
Parameters: 2 7 7 80 10 50 1000
Length:  77275

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2747--2897
27
5.6
27
82
4
178
27
15
27
29
1.96
2748--2897
82
1.8
81
88
4
230
26
15
28
30
1.96
19281--19320
21
1.9
21
89
0
62
45
0
20
35
1.51
19804--19856
25
2.2
24
82
3
61
18
22
20
37
1.94
21947--22199
55
4.8
53
77
11
225
36
16
24
22
1.94
21954--22154
108
1.8
110
87
4
300
34
16
24
23
1.95
22393--22423
16
1.9
16
93
0
53
41
0
22
35
1.54
29312--29390
28
3.0
25
77
17
81
53
8
3
34
1.50
29336--29407
28
2.6
28
85
12
103
54
8
4
33
1.50
29430--29464
16
2.2
16
89
0
52
54
11
5
28
1.59
29549--29605
26
2.2
27
84
6
73
40
10
8
40
1.71
33624--33685
31
2.0
31
93
0
106
29
19
8
43
1.79
40492--40569
18
4.0
18
72
18
66
32
0
7
60
1.25
40608--40649
22
1.9
22
95
0
75
47
0
0
52
1.00
40730--40775
19
2.3
20
96
3
85
47
13
10
28
1.76
40759--40789
14
2.2
14
100
0
62
41
12
6
38
1.69
47052--47099
24
2.0
25
83
4
62
14
22
20
41
1.89
60076--60102
11
2.5
11
100
0
54
33
0
33
33
1.58
69111--69301
27
7.1
27
87
1
258
34
18
21
25
1.96
69961--70012
27
2.0
26
84
3
68
17
26
21
34
1.95
75058--75191
26
5.2
26
80
13
136
28
20
15
35
1.93

Tables:   1

The End!