Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold424
Parameters: 2 7 7 80 10 50 1000
Length:  69344

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35--271
36
6.6
33
71
20
147
8
2
5
83
0.90
34--252
64
3.4
61
79
8
190
8
2
6
82
0.93
136--325
52
3.7
48
79
12
164
16
0
3
79
0.91
35--273
1
239.0
1
71
0
118
8
2
5
83
0.89
294--344
16
3.3
15
80
5
57
19
0
1
78
0.85
294--345
15
3.2
16
78
8
61
19
0
1
78
0.84
310--361
24
2.0
26
82
10
63
19
3
5
71
1.22
5718--5798
42
1.9
42
94
0
144
49
3
18
28
1.65
7882--7943
24
2.4
25
80
17
74
30
11
6
51
1.63
7882--7943
25
2.5
23
82
15
70
30
11
6
51
1.63
8521--8588
21
3.1
22
71
12
59
61
2
2
32
1.26
16544--16650
53
2.0
53
98
0
205
27
27
12
33
1.92
19542--19585
22
2.0
22
100
0
88
54
4
22
18
1.61
21862--21895
13
2.6
13
86
13
52
44
0
0
55
0.99
23604--23656
24
2.2
24
90
6
81
41
0
0
58
0.98
23828--23866
21
1.9
21
94
5
71
30
25
10
33
1.89
26390--26414
12
2.1
12
100
0
50
44
0
8
48
1.32
56941--57088
75
2.0
75
97
2
280
37
19
18
25
1.94
61019--61050
7
4.4
7
96
4
55
62
0
0
37
0.95
62289--62324
19
1.9
18
88
5
54
72
0
0
27
0.85
63769--63879
47
2.4
47
83
6
145
35
22
16
26
1.95
68785--68843
29
2.0
29
86
0
82
42
3
23
30
1.71
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
69051--69082
13
2.5
13
94
0
55
31
0
12
56
1.37
69176--69337
50
3.2
50
83
9
195
25
24
29
20
1.99

Tables:   1

The End!