Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1360
Parameters: 2 7 7 80 10 50 1000
Length:  64588

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5417--5485
34
2.0
34
100
0
138
33
2
5
57
1.37
5427--5487
9
7.0
9
75
14
56
37
1
4
55
1.31
11776--11868
44
2.1
44
88
2
134
43
2
21
33
1.65
11810--11878
21
3.2
21
65
15
50
42
1
20
36
1.61
11790--11879
44
2.0
44
97
0
171
41
2
18
37
1.63
20848--20889
15
2.8
15
79
10
50
16
11
19
52
1.74
30215--30304
39
2.3
39
88
1
137
22
27
23
26
1.99
30952--30991
21
1.9
21
100
0
80
45
12
2
40
1.56
32808--32832
5
5.0
5
100
0
50
60
0
0
40
0.97
36644--36833
40
4.8
40
90
2
278
26
27
22
23
1.99
36632--36833
79
2.5
79
88
6
284
26
27
22
23
1.99
44634--44848
40
5.4
40
86
3
269
25
27
22
24
2.00
50191--50219
7
4.3
7
95
4
51
89
0
10
0
0.48
54277--54544
104
2.6
105
92
4
443
29
30
20
19
1.97
54872--54935
30
2.2
29
81
10
76
29
28
6
35
1.82
54879--54935
30
1.9
30
85
3
80
29
24
7
38
1.82
57843--58066
39
5.7
40
84
8
257
25
21
27
25
1.99
57843--58066
79
2.8
81
82
9
273
25
21
27
25
1.99
57843--58099
79
3.3
79
80
10
208
26
21
27
25
1.99

Tables:   1

The End!