Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2097
Parameters: 2 7 7 80 10 50 1000
Length:  58251

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6533--6668
45
3.2
42
81
15
165
20
15
35
28
1.93
10710--11245
47
11.3
47
93
3
880
32
8
29
29
1.87
10710--11245
96
5.6
94
94
2
880
32
8
29
29
1.87
12623--12721
43
2.3
43
100
0
198
23
15
34
27
1.94
12623--12734
43
2.6
43
92
2
163
25
14
32
27
1.95
13205--13280
36
2.1
37
90
2
118
23
18
31
26
1.97
14956--15039
31
2.7
31
96
1
152
27
27
17
27
1.98
15249--15515
26
10.3
26
81
3
317
30
22
18
28
1.97
16534--16717
54
3.4
53
85
5
228
28
10
21
39
1.86
16424--16684
27
9.6
27
80
6
249
29
8
20
41
1.81
16716--16901
27
6.9
27
87
2
158
41
7
21
29
1.80
16716--16913
54
3.7
54
87
1
263
41
7
22
28
1.81
16716--16899
81
2.3
81
87
1
253
41
7
21
28
1.80
16750--16913
27
6.1
27
89
0
238
40
7
23
29
1.81
24346--24384
12
3.2
12
88
0
51
25
23
43
7
1.80
32676--32752
38
2.0
38
100
0
154
32
7
28
31
1.85
35945--36115
43
4.0
43
78
14
174
25
16
26
31
1.96
39363--39615
125
2.0
125
96
0
470
35
11
15
37
1.83
41282--41454
44
3.8
47
78
15
186
21
21
28
28
1.98
44364--44427
15
4.4
15
84
11
89
10
15
12
60
1.58
46785--46957
45
3.8
45
79
8
199
20
21
28
28
1.98
50386--50535
67
2.2
67
81
8
171
32
17
28
21
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50410--50593
67
2.8
64
77
8
194
29
17
29
22
1.97
56065--56139
39
1.9
39
94
0
132
28
14
20
37
1.92

Tables:   1

The End!