Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3018
Parameters: 2 7 7 80 10 50 1000
Length:  57260

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5371--5478
40
2.7
40
83
9
130
25
21
26
26
1.99
7395--7435
20
2.0
20
85
0
55
58
12
0
29
1.34
15643--15749
40
2.7
40
84
5
119
25
27
20
27
1.99
15686--15869
40
4.6
40
77
9
162
28
26
20
24
1.99
15689--15869
80
2.3
80
82
9
201
28
27
20
24
1.99
19502--19573
33
2.2
33
100
0
144
41
5
19
33
1.75
28585--28721
27
5.1
26
72
5
96
40
23
8
28
1.83
28729--28790
27
2.3
27
80
5
72
41
17
11
29
1.84
33037--33106
27
2.6
28
81
4
74
27
15
18
38
1.91
33056--33109
27
2.0
27
96
0
99
27
9
22
40
1.84
37251--37325
34
2.2
35
88
9
120
26
25
21
26
1.99
40106--40169
20
3.2
20
63
20
53
45
12
1
40
1.51
40096--40174
39
2.0
40
97
2
151
48
12
2
36
1.55
49738--49792
3
18.3
3
77
7
58
60
1
3
34
1.25
50687--50732
22
2.1
21
84
11
58
10
13
17
58
1.62
51352--51403
22
2.4
22
100
0
104
59
9
7
23
1.54

Tables:   1

The End!