Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2346
Parameters: 2 7 7 80 10 50 1000
Length:  50041

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
978--1213
47
4.9
46
71
23
159
28
30
10
30
1.90
2708--2885
85
2.1
85
97
0
338
26
26
8
38
1.85
5626--6481
47
18.3
47
83
10
1037
31
8
30
29
1.87
5931--5965
15
2.2
16
90
5
54
25
8
40
25
1.84
5882--6088
64
3.1
65
84
14
301
29
9
32
28
1.88
5986--6039
26
2.1
26
96
0
99
29
14
31
24
1.95
5947--6087
75
1.9
74
95
2
257
29
9
31
29
1.88
6815--7545
47
15.6
47
88
5
943
33
9
29
27
1.89
6815--7524
191
3.8
188
85
6
946
33
10
29
27
1.89
12876--12955
40
2.0
40
100
0
160
32
17
20
30
1.95
31591--31758
40
4.2
40
83
4
106
25
27
23
23
2.00
31614--31758
40
3.6
40
85
4
193
23
26
24
25
2.00
32945--33020
38
2.0
38
100
0
152
31
23
13
31
1.93
39649--39816
40
4.2
40
83
4
106
25
27
23
23
2.00
39672--39816
40
3.6
40
85
4
193
23
26
24
25
2.00
47846--47970
40
3.2
40
76
17
136
25
26
24
24
2.00

Tables:   1

The End!