Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2214
Parameters: 2 7 7 80 10 50 1000
Length:  53307

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
354--460
26
4.2
26
96
1
198
31
7
25
35
1.84
7383--7490
26
4.2
26
93
0
189
32
7
24
36
1.83
10944--10968
2
12.5
2
100
0
50
52
0
0
48
1.00
12860--12900
19
2.1
20
86
4
57
43
2
0
53
1.13
17639--17703
21
3.1
21
73
6
60
38
23
16
21
1.93
18856--18893
10
3.9
10
86
6
51
68
2
0
28
1.03
28605--28644
20
2.0
21
85
9
57
42
7
5
45
1.54
33050--33430
126
3.0
126
99
0
753
33
17
16
32
1.93
37417--37521
26
4.0
26
90
2
158
37
21
8
32
1.84
37417--37521
52
2.0
52
92
0
174
37
21
8
32
1.84
40968--41002
18
2.0
18
88
5
54
68
0
0
31
0.90
41099--41176
39
2.0
39
97
0
147
41
7
21
29
1.81
41307--41350
21
2.0
21
86
8
61
38
18
6
36
1.77
41330--41392
17
3.5
18
91
6
101
36
14
11
38
1.81
41330--41401
19
3.9
19
89
8
114
36
15
9
38
1.80
41750--41994
45
5.5
45
86
0
276
25
26
14
33
1.94
41767--41994
89
2.5
88
80
4
260
26
27
14
32
1.95
42019--42302
78
3.6
78
86
0
381
26
23
16
32
1.96
50906--50942
19
1.9
19
100
0
74
35
16
10
37
1.83
50909--50950
19
2.3
19
88
8
61
38
11
14
35
1.83
53129--53167
16
2.5
16
80
19
55
48
2
5
43
1.38

Tables:   1

The End!