Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1824
Parameters: 2 7 7 80 10 50 1000
Length:  53184

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6082--6252
39
4.3
39
84
6
202
25
21
28
25
1.99
6029--6252
79
2.8
79
81
7
222
25
20
28
25
1.99
6109--6285
79
2.2
80
82
4
200
25
21
28
24
1.99
13991--14165
39
4.5
39
84
6
203
25
20
28
25
1.99
13997--14165
79
2.2
77
83
4
214
24
20
28
25
1.99
13944--14163
40
5.6
39
79
10
207
25
20
28
25
1.99
14024--14197
77
2.2
79
81
5
194
25
20
28
24
1.99
19795--19965
46
3.7
46
77
15
201
29
28
21
21
1.98
20387--20446
30
2.0
30
90
0
93
30
25
8
36
1.85
25606--25829
39
5.7
40
85
7
255
24
22
28
24
2.00
25607--25829
40
5.6
40
85
7
235
24
22
28
24
2.00
25659--25862
79
2.6
79
84
5
218
25
21
27
24
1.99
33922--34145
79
2.8
78
82
8
274
25
27
22
25
2.00
33922--34145
40
5.7
39
86
7
267
25
27
22
25
2.00
39808--40031
40
5.7
40
86
6
296
24
22
27
25
2.00
39808--40031
78
2.8
80
84
8
296
24
22
27
25
2.00

Tables:   1

The End!