Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold432
Parameters: 2 7 7 80 10 50 1000
Length:  52979

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
66--129
26
2.4
27
80
12
71
51
4
0
43
1.22
124--163
19
2.0
20
90
4
64
80
2
0
17
0.83
3575--3752
27
6.6
27
75
6
119
29
26
16
28
1.97
3575--3752
54
3.3
54
74
12
150
29
26
16
28
1.97
11581--11758
27
6.6
27
75
6
119
29
26
16
28
1.97
11581--11758
54
3.3
54
74
12
150
29
26
16
28
1.97
15601--15656
25
2.2
25
84
6
69
8
7
5
78
1.08
15617--15656
13
3.2
13
82
7
55
7
7
5
80
1.03
16436--16491
26
2.2
25
81
15
62
32
8
7
51
1.60
16622--16721
3
33.3
3
76
4
67
30
9
3
58
1.44
21465--21506
19
2.2
20
86
4
59
26
19
7
47
1.74
29582--29917
43
7.7
43
72
10
281
33
21
24
20
1.97
29561--29913
87
4.1
87
90
1
555
35
21
24
19
1.96
29561--29870
44
7.1
43
68
13
204
35
21
24
18
1.95
31127--31170
3
14.7
3
100
0
88
34
31
0
34
1.58
31169--31254
3
28.7
3
73
9
68
29
5
4
60
1.40
36206--36429
40
5.7
40
80
7
206
25
28
20
25
1.99
36206--36429
79
2.8
78
77
9
195
25
28
20
25
1.99
43750--43968
39
5.6
38
79
12
180
25
28
20
26
1.99
43748--43969
78
2.8
76
79
11
227
25
28
20
25
1.99
43900--43977
40
1.9
41
82
10
97
26
28
20
24
1.99

Tables:   1

The End!