Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold390
Parameters: 2 7 7 80 10 50 1000
Length:  51630

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2143--2175
2
16.5
2
93
0
57
0
0
54
45
0.99
2139--2178
12
3.5
12
86
13
66
0
0
57
42
0.98
6910--6954
21
2.2
20
88
4
63
31
17
22
28
1.97
8913--8957
21
2.2
20
88
4
63
28
26
15
28
1.96
8986--9054
31
2.3
31
82
7
79
23
10
18
47
1.79
16769--16811
18
2.4
17
81
11
50
27
2
18
51
1.59
20305--20755
77
5.8
77
80
7
443
47
12
11
28
1.76
33295--33473
31
5.8
31
86
3
227
29
18
25
26
1.98
33491--33613
47
2.7
46
83
2
138
27
16
26
30
1.97
35147--35182
18
2.0
18
94
0
63
27
0
2
69
1.02
38209--38243
16
2.3
15
90
5
52
62
2
2
31
1.24
38389--38431
20
2.1
21
82
4
52
62
6
2
27
1.33
39077--39127
13
3.8
13
80
12
59
21
0
3
74
0.98
39164--39217
18
3.2
18
76
21
55
77
0
7
14
0.97
39180--39218
17
2.3
17
86
8
53
71
0
10
17
1.12
39431--39488
26
2.1
27
87
6
82
5
5
27
62
1.38
40163--40415
87
2.8
87
76
5
238
36
20
16
26
1.93
40437--40578
76
1.9
74
89
2
221
30
21
17
29
1.96
40606--40914
92
3.8
81
77
13
242
33
18
18
29
1.95
40621--40844
77
2.9
78
83
7
260
34
17
18
29
1.94
40686--41162
169
2.8
169
90
3
719
31
19
20
28
1.97
40470--41014
249
2.2
239
82
7
614
33
18
18
29
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40756--40935
92
2.0
91
87
1
261
34
16
21
27
1.95
40848--41014
77
2.1
78
86
2
228
32
19
20
27
1.97
40915--41106
93
2.1
93
83
5
237
33
19
21
26
1.97
41018--41162
77
1.9
78
88
2
220
26
22
19
31
1.98
51023--51185
44
3.8
44
76
11
149
26
19
25
28
1.98

Tables:   1

The End!