Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3802
Parameters: 2 7 7 80 10 50 1000
Length:  50801

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4224--4303
30
2.6
31
81
15
105
30
30
15
25
1.95
13948--14055
15
7.2
15
69
12
87
26
22
7
43
1.79
13938--14061
30
4.1
30
93
1
203
26
24
6
42
1.78
18637--18744
15
7.2
15
67
12
78
25
22
7
44
1.79
18627--18750
30
4.1
30
93
1
203
25
24
6
43
1.78
20430--20553
41
3.0
39
76
15
108
16
20
26
35
1.95
20444--20560
41
2.9
41
79
2
128
17
21
27
34
1.95
28628--28678
22
2.2
25
89
10
81
62
3
5
27
1.36
28660--28699
13
2.6
16
81
18
50
67
2
7
22
1.28
28754--28780
13
2.1
13
100
0
54
22
37
14
25
1.93
34919--34953
18
1.9
18
88
11
54
31
5
8
54
1.54
36918--36980
29
2.1
31
82
11
78
36
17
12
33
1.88
37851--37909
29
2.0
29
100
0
118
44
10
10
35
1.72
44585--44775
40
4.8
40
90
2
269
23
29
24
23
1.99

Tables:   1

The End!