Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3790
Parameters: 2 7 7 80 10 50 1000
Length:  49897

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4138--4225
21
4.1
22
77
10
92
35
26
23
14
1.94
4143--4224
44
1.9
41
82
7
101
32
28
24
14
1.94
4430--4512
28
3.0
28
89
3
123
46
30
3
19
1.66
4416--4486
28
2.9
23
77
18
79
45
33
4
16
1.67
15472--15513
13
2.9
14
80
13
50
54
0
0
45
0.99
15476--15512
16
2.3
16
86
13
58
59
0
0
40
0.97
15545--15601
15
3.5
15
71
17
51
49
1
1
47
1.22
21955--22001
19
2.4
19
85
3
58
78
2
8
10
1.04
21935--22006
17
4.2
17
73
16
60
79
2
8
9
1.04
22016--22059
17
2.5
18
85
3
54
65
2
29
2
1.16
23072--23142
28
2.9
23
77
18
79
45
33
4
16
1.67
23086--23169
28
3.0
28
87
1
114
45
29
4
20
1.71
34147--34188
13
2.9
14
80
13
50
54
0
0
45
0.99
34151--34187
16
2.3
16
86
13
58
59
0
0
40
0.97
34220--34276
15
3.5
15
71
17
51
49
1
1
47
1.22
40474--40514
19
2.2
19
100
0
82
39
4
26
29
1.77
40618--40693
16
4.7
15
74
20
64
77
2
9
10
1.08
40642--40687
19
2.4
19
85
3
56
78
2
8
10
1.05
40703--40744
16
2.4
18
84
7
52
64
2
30
2
1.19

Tables:   1

The End!