Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: Scaffold958
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 47982
ACGTcount: A:0.33, C:0.19, G:0.15, T:0.34
Found at i:20632 original size:18 final size:18
Alignment explanation
Indices: 20609--20647 Score: 78
Period size: 18 Copynumber: 2.2 Consensus size: 18
20599 AAGTCTCTCC
20609 TTTAGAAAGTTTTGTTAT
1 TTTAGAAAGTTTTGTTAT
20627 TTTAGAAAGTTTTGTTAT
1 TTTAGAAAGTTTTGTTAT
20645 TTT
1 TTT
20648 GTTCTAAACT
Statistics
Matches: 21, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
18 21 1.00
ACGTcount: A:0.26, C:0.00, G:0.15, T:0.59
Consensus pattern (18 bp):
TTTAGAAAGTTTTGTTAT
Found at i:20863 original size:9 final size:9
Alignment explanation
Indices: 20852--20930 Score: 72
Period size: 9 Copynumber: 8.3 Consensus size: 9
20842 ATCTTTGTTC
20852 TTTCTTTTCT
1 TTTC-TTTCT
20862 TTTCTTTCT
1 TTTCTTTCT
20871 TTTCTTTCT
1 TTTCTTTCT
20880 TTTAC-TTCAT
1 TTT-CTTTC-T
*
20890 TGTTCTTTTT
1 T-TTCTTTCT
20900 TTTCTTTCT
1 TTTCTTTCT
*
20909 TTTACTTTTT
1 TTT-CTTTCT
20919 TGTTC-TTCT
1 T-TTCTTTCT
20928 TTT
1 TTT
20931 TCTTGTTTTT
Statistics
Matches: 59, Mismatches: 4, Indels: 14
0.77 0.05 0.18
Matches are distributed among these distances:
8 2 0.03
9 34 0.58
10 17 0.29
11 6 0.10
ACGTcount: A:0.04, C:0.18, G:0.03, T:0.76
Consensus pattern (9 bp):
TTTCTTTCT
Found at i:20866 original size:14 final size:13
Alignment explanation
Indices: 20849--20929 Score: 60
Period size: 13 Copynumber: 6.2 Consensus size: 13
20839 TTCATCTTTG
20849 TTCTTTCTTTTCTT
1 TTCTTTCTTTTC-T
20863 TTCTTTCTTTTCT
1 TTCTTTCTTTTCT
* *
20876 TTCTTT-TACTTCA
1 TTCTTTCT-TTTCT
* *
20889 TT-GTTCTTTTTT
1 TTCTTTCTTTTCT
20901 TTCTTTCTTTTACT
1 TTCTTTCTTTT-CT
*
20915 TT-TTTGTTCTTCT
1 TTCTTTCTT-TTCT
20928 TT
1 TT
20930 TTCTTGTTTT
Statistics
Matches: 53, Mismatches: 9, Indels: 11
0.73 0.12 0.15
Matches are distributed among these distances:
12 7 0.13
13 29 0.55
14 17 0.32
ACGTcount: A:0.04, C:0.19, G:0.02, T:0.75
Consensus pattern (13 bp):
TTCTTTCTTTTCT
Found at i:20874 original size:19 final size:17
Alignment explanation
Indices: 20852--20940 Score: 79
Period size: 19 Copynumber: 4.6 Consensus size: 17
20842 ATCTTTGTTC
20852 TTTCTTTTCTTTTCTTTCT
1 TTTCTTTT-TTTTC-TTCT
*
20871 TTTCTTTCTTTTACTTCAT
1 TTTCTTT-TTTTTCTTC-T
20890 TGTTCTTTTTTTTCTTTCT
1 T-TTCTTTTTTTTC-TTCT
20909 TTTACTTTTTTGTTCTTCTT
1 TTT-CTTTTTT-TTCTTC-T
20929 TTTCTTGTTTTT
1 TTTCTT-TTTTT
20941 GTATAGATAC
Statistics
Matches: 60, Mismatches: 2, Indels: 16
0.77 0.03 0.21
Matches are distributed among these distances:
18 5 0.08
19 34 0.57
20 21 0.35
ACGTcount: A:0.03, C:0.17, G:0.03, T:0.76
Consensus pattern (17 bp):
TTTCTTTTTTTTCTTCT
Found at i:20897 original size:29 final size:29
Alignment explanation
Indices: 20863--20930 Score: 102
Period size: 29 Copynumber: 2.4 Consensus size: 29
20853 TTCTTTTCTT
20863 TTCTTTCTTTTCTTTCTTTTACTTCATTG
1 TTCTTTCTTTTCTTTCTTTTACTTCATTG
* **
20892 TTCTTTTTTTTCTTTCTTTTACTTTTTTG
1 TTCTTTCTTTTCTTTCTTTTACTTCATTG
20921 TTC-TTCTTTT
1 TTCTTTCTTTT
20931 TCTTGTTTTT
Statistics
Matches: 35, Mismatches: 4, Indels: 1
0.88 0.10 0.03
Matches are distributed among these distances:
28 6 0.17
29 29 0.83
ACGTcount: A:0.04, C:0.18, G:0.03, T:0.75
Consensus pattern (29 bp):
TTCTTTCTTTTCTTTCTTTTACTTCATTG
Found at i:20931 original size:29 final size:29
Alignment explanation
Indices: 20870--20934 Score: 103
Period size: 29 Copynumber: 2.2 Consensus size: 29
20860 CTTTTCTTTC
*
20870 TTTTCTTTCTTTTACTTCATTGTTCTTTT
1 TTTTCTTTCTTTTACTTCATTGTTCTTCT
**
20899 TTTTCTTTCTTTTACTTTTTTGTTCTTCT
1 TTTTCTTTCTTTTACTTCATTGTTCTTCT
20928 TTTTCTT
1 TTTTCTT
20935 GTTTTTGTAT
Statistics
Matches: 33, Mismatches: 3, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
29 33 1.00
ACGTcount: A:0.05, C:0.17, G:0.03, T:0.75
Consensus pattern (29 bp):
TTTTCTTTCTTTTACTTCATTGTTCTTCT
Found at i:20939 original size:9 final size:9
Alignment explanation
Indices: 20833--20940 Score: 72
Period size: 10 Copynumber: 11.1 Consensus size: 9
20823 TTTTTCTTCA
*
20833 TCTTTTTTCA
1 TCTTTTTT-T
20843 TCTTTGTTCTT
1 TCTTT-TT-TT
20854 TCTTTTCTTT
1 TCTTTT-TTT
*
20864 TCTTTCTTT
1 TCTTTTTTT
20873 TCTTTCTTTT
1 TCTTT-TTTT
* * *
20883 ACTTCATTGT
1 TCTT-TTTTT
20893 TCTTTTTTT
1 TCTTTTTTT
20902 TCTTTCTTTT
1 TCTTT-TTTT
*
20912 ACTTTTTTGT
1 TCTTTTTT-T
*
20922 TCTTCTTTT
1 TCTTTTTTT
*
20931 TCTTGTTTT
1 TCTTTTTTT
20940 T
1 T
20941 GTATAGATAC
Statistics
Matches: 78, Mismatches: 13, Indels: 15
0.74 0.12 0.14
Matches are distributed among these distances:
9 29 0.37
10 40 0.51
11 8 0.10
12 1 0.01
ACGTcount: A:0.04, C:0.18, G:0.04, T:0.75
Consensus pattern (9 bp):
TCTTTTTTT
Found at i:22133 original size:8 final size:8
Alignment explanation
Indices: 22117--22146 Score: 51
Period size: 8 Copynumber: 3.8 Consensus size: 8
22107 TAACCAAGGT
*
22117 TAAAATGA
1 TAAATTGA
22125 TAAATTGA
1 TAAATTGA
22133 TAAATTGA
1 TAAATTGA
22141 TAAATT
1 TAAATT
22147 AATTAAATTA
Statistics
Matches: 21, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
8 21 1.00
ACGTcount: A:0.53, C:0.00, G:0.10, T:0.37
Consensus pattern (8 bp):
TAAATTGA
Found at i:23063 original size:41 final size:40
Alignment explanation
Indices: 22948--23066 Score: 107
Period size: 41 Copynumber: 3.0 Consensus size: 40
22938 CCTTATTCGA
* * * **
22948 GCTTTGTGTCTAGCAGGCTTTGTGCTG-GTGATAT-TTGG
1 GCTTTGTGCCTAGCAGGCTTTGTGCAGTGTGTTATATCAG
* * ** * *
22986 GCTCTATGCCTAGCAGGCTTCATGCCGGTGTATTATATCAG
1 GCTTTGTGCCTAGCAGGCTTTGTG-CAGTGTGTTATATCAG
23027 GCTTTGTGCCTAGCAGGCTTTGTGTCAGTGTGTTATATCA
1 GCTTTGTGCCTAGCAGGCTTTGTG-CAGTGTGTTATATCA
23067 ACCTTTGAGC
Statistics
Matches: 61, Mismatches: 17, Indels: 3
0.75 0.21 0.04
Matches are distributed among these distances:
38 19 0.31
39 2 0.03
40 5 0.08
41 35 0.57
ACGTcount: A:0.15, C:0.18, G:0.29, T:0.38
Consensus pattern (40 bp):
GCTTTGTGCCTAGCAGGCTTTGTGCAGTGTGTTATATCAG
Found at i:23073 original size:41 final size:41
Alignment explanation
Indices: 22992--23088 Score: 104
Period size: 41 Copynumber: 2.4 Consensus size: 41
22982 TTGGGCTCTA
* **
22992 TGCCTAGCAGGCTTCATGCCGGTGTATTATATCAGGCTTTG
1 TGCCTAGCAGGCTTCATGCCAGTGTATTATATCAACCTTTG
** * *
23033 TGCCTAGCAGGCTTTGTGTCAGTGTGTTATATCAACCTTTG
1 TGCCTAGCAGGCTTCATGCCAGTGTATTATATCAACCTTTG
* * *
23074 AGCCTGGCAGTCTTC
1 TGCCTAGCAGGCTTC
23089 GTACCAATAT
Statistics
Matches: 45, Mismatches: 11, Indels: 0
0.80 0.20 0.00
Matches are distributed among these distances:
41 45 1.00
ACGTcount: A:0.16, C:0.23, G:0.26, T:0.35
Consensus pattern (41 bp):
TGCCTAGCAGGCTTCATGCCAGTGTATTATATCAACCTTTG
Found at i:28699 original size:16 final size:18
Alignment explanation
Indices: 28665--28704 Score: 57
Period size: 16 Copynumber: 2.3 Consensus size: 18
28655 GATATAATAA
*
28665 TAAATTTAATTTTTCGTT
1 TAAATTTAATTTTTAGTT
28683 TAAATTT-A-TTTTAGTT
1 TAAATTTAATTTTTAGTT
28699 TAAATT
1 TAAATT
28705 AAAATAATTA
Statistics
Matches: 21, Mismatches: 1, Indels: 2
0.88 0.04 0.08
Matches are distributed among these distances:
16 13 0.62
17 1 0.05
18 7 0.33
ACGTcount: A:0.33, C:0.03, G:0.05, T:0.60
Consensus pattern (18 bp):
TAAATTTAATTTTTAGTT
Found at i:31263 original size:30 final size:31
Alignment explanation
Indices: 31204--31267 Score: 96
Period size: 31 Copynumber: 2.1 Consensus size: 31
31194 ACTTAACAAG
31204 CAAATGCTTCTAAAATAATAATAAAAATTAA
1 CAAATGCTTCTAAAATAATAATAAAAATTAA
*
31235 CAAATGCCTT-TAAAATAATAA-GAAAATTAA
1 CAAATG-CTTCTAAAATAATAATAAAAATTAA
31265 CAA
1 CAA
31268 TAAAATAAAT
Statistics
Matches: 31, Mismatches: 1, Indels: 3
0.89 0.03 0.09
Matches are distributed among these distances:
30 11 0.35
31 17 0.55
32 3 0.10
ACGTcount: A:0.58, C:0.11, G:0.05, T:0.27
Consensus pattern (31 bp):
CAAATGCTTCTAAAATAATAATAAAAATTAA
Found at i:33227 original size:37 final size:37
Alignment explanation
Indices: 33186--33288 Score: 179
Period size: 37 Copynumber: 2.8 Consensus size: 37
33176 CGAATAGTCC
*
33186 CCACACGTAGTTATCGGGTCTTACCCGGACAAAATCT
1 CCACACGTAGTCATCGGGTCTTACCCGGACAAAATCT
*
33223 CCACACGTAGTCATCGGGTCTTACCCGGACATAATCT
1 CCACACGTAGTCATCGGGTCTTACCCGGACAAAATCT
*
33260 CCACAAGTAGTCATCGGGTCTTACCCGGA
1 CCACACGTAGTCATCGGGTCTTACCCGGA
33289 ATATATTTCC
Statistics
Matches: 63, Mismatches: 3, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
37 63 1.00
ACGTcount: A:0.25, C:0.31, G:0.20, T:0.23
Consensus pattern (37 bp):
CCACACGTAGTCATCGGGTCTTACCCGGACAAAATCT
Found at i:33459 original size:46 final size:47
Alignment explanation
Indices: 33407--33509 Score: 136
Period size: 48 Copynumber: 2.2 Consensus size: 47
33397 CACATTTGGT
*
33407 CATTCGGC-CACAATATACACACATCTCCTACATATTTCACACTAGC
1 CATTCGGCTCACAATATACACACATCTCATACATATTTCACACTAGC
* * * * *
33453 CATTCGGCTTTACCATATATACATATCTCATACATATTTCACATTAGC
1 CATTCGGC-TCACAATATACACACATCTCATACATATTTCACACTAGC
33501 CATTCGGCT
1 CATTCGGCT
33510 TTACCACATA
Statistics
Matches: 49, Mismatches: 6, Indels: 3
0.84 0.10 0.05
Matches are distributed among these distances:
46 8 0.16
47 1 0.02
48 40 0.82
ACGTcount: A:0.30, C:0.30, G:0.08, T:0.32
Consensus pattern (47 bp):
CATTCGGCTCACAATATACACACATCTCATACATATTTCACACTAGC
Found at i:33481 original size:48 final size:48
Alignment explanation
Indices: 33419--33526 Score: 171
Period size: 48 Copynumber: 2.2 Consensus size: 48
33409 TTCGGCCACA
* * *
33419 ATATACACACATCTCCTACATATTTCACACTAGCCATTCGGCTTTACC
1 ATATATACATATCTCATACATATTTCACACTAGCCATTCGGCTTTACC
*
33467 ATATATACATATCTCATACATATTTCACATTAGCCATTCGGCTTTACC
1 ATATATACATATCTCATACATATTTCACACTAGCCATTCGGCTTTACC
*
33515 ACATATACATAT
1 ATATATACATAT
33527 ATGGCTTTAC
Statistics
Matches: 55, Mismatches: 5, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
48 55 1.00
ACGTcount: A:0.32, C:0.28, G:0.06, T:0.34
Consensus pattern (48 bp):
ATATATACATATCTCATACATATTTCACACTAGCCATTCGGCTTTACC
Found at i:33533 original size:23 final size:23
Alignment explanation
Indices: 33506--33549 Score: 88
Period size: 23 Copynumber: 1.9 Consensus size: 23
33496 TTAGCCATTC
33506 GGCTTTACCACATATACATATAT
1 GGCTTTACCACATATACATATAT
33529 GGCTTTACCACATATACATAT
1 GGCTTTACCACATATACATAT
33550 CTCATACATA
Statistics
Matches: 21, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
23 21 1.00
ACGTcount: A:0.34, C:0.23, G:0.09, T:0.34
Consensus pattern (23 bp):
GGCTTTACCACATATACATATAT
Found at i:33544 original size:71 final size:71
Alignment explanation
Indices: 33458--33597 Score: 262
Period size: 71 Copynumber: 2.0 Consensus size: 71
33448 CTAGCCATTC
* *
33458 GGCTTTACCATATATACATATCTCATACATATTTCACATTAGCCATTCGGCTTTACCACATATAC
1 GGCTTTACCACATATACATATCTCATACATATTTCACACTAGCCATTCGGCTTTACCACATATAC
33523 ATATAT
66 ATATAT
33529 GGCTTTACCACATATACATATCTCATACATATTTCACACTAGCCATTCGGCTTTACCACATATAC
1 GGCTTTACCACATATACATATCTCATACATATTTCACACTAGCCATTCGGCTTTACCACATATAC
33594 ATAT
66 ATAT
33598 CTCATATATT
Statistics
Matches: 67, Mismatches: 2, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
71 67 1.00
ACGTcount: A:0.32, C:0.26, G:0.07, T:0.35
Consensus pattern (71 bp):
GGCTTTACCACATATACATATCTCATACATATTTCACACTAGCCATTCGGCTTTACCACATATAC
ATATAT
Found at i:33564 original size:119 final size:117
Alignment explanation
Indices: 33429--33643 Score: 394
Period size: 119 Copynumber: 1.8 Consensus size: 117
33419 ATATACACAC
* *
33429 ATCTCCTACATATTTCACACTAGCCATTCGGCTTTACCATATATACATATCTCATACATATTTCA
1 ATCTCATACATATTTCACACTAGCCATTCGGCTTTACCACATATACATATCTCAT--ATATTTCA
33494 CATTAGCCATTCGGCTTTACCACATATACATATATGGCTTTACCACATATACAT
64 CATTAGCCATTCGGCTTTACCACATATACATATATGGCTTTACCACATATACAT
33548 ATCTCATACATATTTCACACTAGCCATTCGGCTTTACCACATATACATATCTCATATATTTCACA
1 ATCTCATACATATTTCACACTAGCCATTCGGCTTTACCACATATACATATCTCATATATTTCACA
33613 TTAGCCATTCGGCTTTACCACATATACATAT
66 TTAGCCATTCGGCTTTACCACATATACATAT
33644 CTCATACATA
Statistics
Matches: 94, Mismatches: 2, Indels: 2
0.96 0.02 0.02
Matches are distributed among these distances:
117 41 0.44
119 53 0.56
ACGTcount: A:0.31, C:0.27, G:0.07, T:0.35
Consensus pattern (117 bp):
ATCTCATACATATTTCACACTAGCCATTCGGCTTTACCACATATACATATCTCATATATTTCACA
TTAGCCATTCGGCTTTACCACATATACATATATGGCTTTACCACATATACAT
Found at i:33585 original size:48 final size:48
Alignment explanation
Indices: 33529--33739 Score: 372
Period size: 48 Copynumber: 4.4 Consensus size: 48
33519 ATACATATAT
33529 GGCTTTACCACATATACATATCTCATACATATTTCACACTAGCCATTC
1 GGCTTTACCACATATACATATCTCATACATATTTCACACTAGCCATTC
*
33577 GGCTTTACCACATATACATATCTCAT--ATATTTCACATTAGCCATTC
1 GGCTTTACCACATATACATATCTCATACATATTTCACACTAGCCATTC
*
33623 GGCTTTACCACATATACATATCTCATACATATTTCACATTAGCCATTC
1 GGCTTTACCACATATACATATCTCATACATATTTCACACTAGCCATTC
33671 GGCTTTACCACATATACATATCTCATACATATTTCACACTAGCCATTC
1 GGCTTTACCACATATACATATCTCATACATATTTCACACTAGCCATTC
* *
33719 GGCTTTACCACACATATATAT
1 GGCTTTACCACATATACATAT
33740 TTATCTTGTA
Statistics
Matches: 157, Mismatches: 4, Indels: 4
0.95 0.02 0.02
Matches are distributed among these distances:
46 45 0.29
48 112 0.71
ACGTcount: A:0.31, C:0.27, G:0.07, T:0.35
Consensus pattern (48 bp):
GGCTTTACCACATATACATATCTCATACATATTTCACACTAGCCATTC
Found at i:33637 original size:94 final size:95
Alignment explanation
Indices: 33529--33739 Score: 370
Period size: 94 Copynumber: 2.2 Consensus size: 95
33519 ATACATATAT
33529 GGCTTTACCACATATACATATCTCATACATATTTCACACTAGCCATTCGGCTTTACCACATATAC
1 GGCTTTACCACATATACATATCTCATACATATTTCACACTAGCCATTCGGCTTTACCACATATAC
*
33594 ATATCTCAT-ATATTTCACATTAGCCATTC
66 ATATCTCATAATATTTCACACTAGCCATTC
*
33623 GGCTTTACCACATATACATATCTCATACATATTTCACATTAGCCATTCGGCTTTACCACATATAC
1 GGCTTTACCACATATACATATCTCATACATATTTCACACTAGCCATTCGGCTTTACCACATATAC
33688 ATATCTCATACATATTTCACACTAGCCATTC
66 ATATCTCATA-ATATTTCACACTAGCCATTC
* *
33719 GGCTTTACCACACATATATAT
1 GGCTTTACCACATATACATAT
33740 TTATCTTGTA
Statistics
Matches: 111, Mismatches: 4, Indels: 2
0.95 0.03 0.02
Matches are distributed among these distances:
94 73 0.66
96 38 0.34
ACGTcount: A:0.31, C:0.27, G:0.07, T:0.35
Consensus pattern (95 bp):
GGCTTTACCACATATACATATCTCATACATATTTCACACTAGCCATTCGGCTTTACCACATATAC
ATATCTCATAATATTTCACACTAGCCATTC
Found at i:37299 original size:28 final size:28
Alignment explanation
Indices: 37268--37424 Score: 145
Period size: 28 Copynumber: 5.5 Consensus size: 28
37258 CTGACTGATT
*
37268 TCGCACACATAGCGCTCGATTAAAGAAC
1 TCGCACACATAGTGCTCGATTAAAGAAC
* * *
37296 TCGCACACATAGTGCCTCAATTACCA-ATC
1 TCGCACACATAGTG-CTCGATTA-AAGAAC
*
37325 TCGCACACATAGTGCTCGATTGAAGAAC
1 TCGCACACATAGTGCTCGATTAAAGAAC
* * ** *
37353 TCGCACACATAGTGCCTCAACTACTGATC
1 TCGCACACATAGTG-CTCGATTAAAGAAC
* * *
37382 TGGCACACATAGTGCTCGGTTGAAGAAC
1 TCGCACACATAGTGCTCGATTAAAGAAC
* *
37410 TTGCACACACAGTGC
1 TCGCACACATAGTGC
37425 CTCATAACTC
Statistics
Matches: 101, Mismatches: 24, Indels: 8
0.76 0.18 0.06
Matches are distributed among these distances:
27 1 0.01
28 55 0.54
29 44 0.44
30 1 0.01
ACGTcount: A:0.31, C:0.29, G:0.18, T:0.22
Consensus pattern (28 bp):
TCGCACACATAGTGCTCGATTAAAGAAC
Found at i:37328 original size:29 final size:29
Alignment explanation
Indices: 37295--37396 Score: 118
Period size: 29 Copynumber: 3.6 Consensus size: 29
37285 GATTAAAGAA
37295 CTCGCACACATAGTGCCTCAATTACCAAT
1 CTCGCACACATAGTGCCTCAATTACCAAT
* **
37324 CTCGCACACATAGTG-CTCGATTGAAGAA-
1 CTCGCACACATAGTGCCTCAATT-ACCAAT
* **
37352 CTCGCACACATAGTGCCTCAACTACTGAT
1 CTCGCACACATAGTGCCTCAATTACCAAT
*
37381 CTGGCACACATAGTGC
1 CTCGCACACATAGTGC
37397 TCGGTTGAAG
Statistics
Matches: 61, Mismatches: 9, Indels: 6
0.80 0.12 0.08
Matches are distributed among these distances:
28 23 0.38
29 38 0.62
ACGTcount: A:0.29, C:0.31, G:0.17, T:0.23
Consensus pattern (29 bp):
CTCGCACACATAGTGCCTCAATTACCAAT
Found at i:37335 original size:57 final size:57
Alignment explanation
Indices: 37268--37428 Score: 241
Period size: 57 Copynumber: 2.8 Consensus size: 57
37258 CTGACTGATT
* * *
37268 TCGCACACATAGCGCTCGATTAAAGAACTCGCACACATAGTGCCTCAATTACCAATC
1 TCGCACACATAGTGCTCGATTGAAGAACTCGCACACATAGTGCCTCAACTACCAATC
**
37325 TCGCACACATAGTGCTCGATTGAAGAACTCGCACACATAGTGCCTCAACTACTGATC
1 TCGCACACATAGTGCTCGATTGAAGAACTCGCACACATAGTGCCTCAACTACCAATC
* * * *
37382 TGGCACACATAGTGCTCGGTTGAAGAACTTGCACACACAGTGCCTCA
1 TCGCACACATAGTGCTCGATTGAAGAACTCGCACACATAGTGCCTCA
37429 TAACTCCAGC
Statistics
Matches: 95, Mismatches: 9, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
57 95 1.00
ACGTcount: A:0.30, C:0.30, G:0.18, T:0.22
Consensus pattern (57 bp):
TCGCACACATAGTGCTCGATTGAAGAACTCGCACACATAGTGCCTCAACTACCAATC
Found at i:37499 original size:39 final size:40
Alignment explanation
Indices: 37456--37737 Score: 467
Period size: 39 Copynumber: 7.3 Consensus size: 40
37446 CCTTCGAGGT
*
37456 TTAGCCCGGATATATCACTAGCACGAATGCT-TTCGGAAC
1 TTAGCCCGGATACATCACTAGCACGAATGCTCTTCGGAAC
*
37495 TTAGCCCGGATACATTACTAGCACGAATGCTCTTCGGAAC
1 TTAGCCCGGATACATCACTAGCACGAATGCTCTTCGGAAC
37535 TTAGCCCGGATACATC-CTAGCACGAATGCTCTTCGGAAC
1 TTAGCCCGGATACATCACTAGCACGAATGCTCTTCGGAAC
37574 TTAGCCCGGATACATCACTAGCACGAATGCTCTTC-GAAC
1 TTAGCCCGGATACATCACTAGCACGAATGCTCTTCGGAAC
37613 TTAG-CCGGATACATCACTAGCACGAATGCTCTTCGGAAC
1 TTAGCCCGGATACATCACTAGCACGAATGCTCTTCGGAAC
37652 TTAGCCCGGAT-CATCACTAGCACGAATGCTCTT-----C
1 TTAGCCCGGATACATCACTAGCACGAATGCTCTTCGGAAC
*
37686 TTAGCCCGGATACATCACTAGCACGAATGCTCTTCGGGAC
1 TTAGCCCGGATACATCACTAGCACGAATGCTCTTCGGAAC
37726 TTAGCCCGGATA
1 TTAGCCCGGATA
37738 TATATAACTC
Statistics
Matches: 230, Mismatches: 3, Indels: 19
0.91 0.01 0.08
Matches are distributed among these distances:
34 12 0.05
35 22 0.10
38 30 0.13
39 106 0.46
40 60 0.26
ACGTcount: A:0.27, C:0.29, G:0.20, T:0.24
Consensus pattern (40 bp):
TTAGCCCGGATACATCACTAGCACGAATGCTCTTCGGAAC
Found at i:37633 original size:78 final size:79
Alignment explanation
Indices: 37456--37737 Score: 472
Period size: 79 Copynumber: 3.7 Consensus size: 79
37446 CCTTCGAGGT
* *
37456 TTAGCCCGGATATATCACTAGCACGAATGCT-TTCGGAACTTAGCCCGGATACATTACTAGCACG
1 TTAGCCCGGATACATCACTAGCACGAATGCTCTTCGGAACTTAGCCCGGATACATCACTAGCACG
37520 AATGCTCTTCGGAAC
66 AATGCTCTTC-GAAC
37535 TTAGCCCGGATACATC-CTAGCACGAATGCTCTTCGGAACTTAGCCCGGATACATCACTAGCACG
1 TTAGCCCGGATACATCACTAGCACGAATGCTCTTCGGAACTTAGCCCGGATACATCACTAGCACG
37599 AATGCTCTTCGAAC
66 AATGCTCTTCGAAC
37613 TTAG-CCGGATACATCACTAGCACGAATGCTCTTCGGAACTTAGCCCGGAT-CATCACTAGCACG
1 TTAGCCCGGATACATCACTAGCACGAATGCTCTTCGGAACTTAGCCCGGATACATCACTAGCACG
37676 AATGCTCTT----C
66 AATGCTCTTCGAAC
*
37686 TTAGCCCGGATACATCACTAGCACGAATGCTCTTCGGGACTTAGCCCGGATA
1 TTAGCCCGGATACATCACTAGCACGAATGCTCTTCGGAACTTAGCCCGGATA
37738 TATATAACTC
Statistics
Matches: 196, Mismatches: 3, Indels: 12
0.93 0.01 0.06
Matches are distributed among these distances:
73 5 0.03
74 45 0.23
77 33 0.17
78 56 0.29
79 57 0.29
ACGTcount: A:0.27, C:0.29, G:0.20, T:0.24
Consensus pattern (79 bp):
TTAGCCCGGATACATCACTAGCACGAATGCTCTTCGGAACTTAGCCCGGATACATCACTAGCACG
AATGCTCTTCGAAC
Found at i:39076 original size:37 final size:37
Alignment explanation
Indices: 39023--39125 Score: 188
Period size: 37 Copynumber: 2.8 Consensus size: 37
39013 CGAATAGTCC
*
39023 CCACACGTAGTTATCGGGTCTTACCCGGACAAAATCT
1 CCACACGTAGTCATCGGGTCTTACCCGGACAAAATCT
*
39060 CCACACGTAGTCATCGGGTCTTACCCGGACATAATCT
1 CCACACGTAGTCATCGGGTCTTACCCGGACAAAATCT
39097 CCACACGTAGTCATCGGGTCTTACCCGGA
1 CCACACGTAGTCATCGGGTCTTACCCGGA
39126 ATATATTTCC
Statistics
Matches: 64, Mismatches: 2, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
37 64 1.00
ACGTcount: A:0.24, C:0.32, G:0.20, T:0.23
Consensus pattern (37 bp):
CCACACGTAGTCATCGGGTCTTACCCGGACAAAATCT
Found at i:39324 original size:48 final size:48
Alignment explanation
Indices: 39266--39648 Score: 673
Period size: 48 Copynumber: 8.0 Consensus size: 48
39256 ATATACACAC
*
39266 ATCTCCTACATATTTCACACTAGCCATTCGGCTTTACCACATATACAT
1 ATCTCATACATATTTCACACTAGCCATTCGGCTTTACCACATATACAT
*
39314 ATCTCATACATATTTCACATTAGCCATTCGGCTTTACCACATATACAT
1 ATCTCATACATATTTCACACTAGCCATTCGGCTTTACCACATATACAT
39362 ATCTCATACATATTTCACACTAGCCATTCGGCTTTACCACATATACAT
1 ATCTCATACATATTTCACACTAGCCATTCGGCTTTACCACATATACAT
39410 ATCTCATACATATTTCACA-TAGCCATTCGGCTTTACCACATATACAT
1 ATCTCATACATATTTCACACTAGCCATTCGGCTTTACCACATATACAT
**
39457 GCCTCATACATATTTCACACTAGCCATTCGGCTTTACCACATATACAT
1 ATCTCATACATATTTCACACTAGCCATTCGGCTTTACCACATATACAT
*
39505 ATCTCAT--ATATTTCACATTAGCCATTCGGCTTTACCACATATACAT
1 ATCTCATACATATTTCACACTAGCCATTCGGCTTTACCACATATACAT
*
39551 ATCTCATACATATTTCACATTAGCCATTCGGCTTTACCACATATACAT
1 ATCTCATACATATTTCACACTAGCCATTCGGCTTTACCACATATACAT
* *
39599 ATCTCATACATATTTCACACTAGCCATTCGGCTTTACCACACATATAT
1 ATCTCATACATATTTCACACTAGCCATTCGGCTTTACCACATATACAT
39647 AT
1 AT
39649 ATTTATCTTG
Statistics
Matches: 321, Mismatches: 11, Indels: 6
0.95 0.03 0.02
Matches are distributed among these distances:
46 45 0.14
47 45 0.14
48 231 0.72
ACGTcount: A:0.31, C:0.28, G:0.07, T:0.34
Consensus pattern (48 bp):
ATCTCATACATATTTCACACTAGCCATTCGGCTTTACCACATATACAT
Found at i:39561 original size:189 final size:191
Alignment explanation
Indices: 39272--39639 Score: 704
Period size: 189 Copynumber: 1.9 Consensus size: 191
39262 ACACATCTCC
39272 TACATATTTCACACTAGCCATTCGGCTTTACCACATATACATATCTCATACATATTTCACATTAG
1 TACATATTTCACACTAGCCATTCGGCTTTACCACATATACATATCTCATA-ATATTTCACATTAG
39337 CCATTCGGCTTTACCACATATACATATCTCATACATATTTCACACTAGCCATTCGGCTTTACCAC
65 CCATTCGGCTTTACCACATATACATATCTCATACATATTTCACACTAGCCATTCGGCTTTACCAC
39402 ATATACATATCTCATACATATTTCACA-TAGCCATTCGGCTTTACCACATATACATGCCTCA
130 ATATACATATCTCATACATATTTCACACTAGCCATTCGGCTTTACCACATATACATGCCTCA
39463 TACATATTTCACACTAGCCATTCGGCTTTACCACATATACATATCTCAT-ATATTTCACATTAGC
1 TACATATTTCACACTAGCCATTCGGCTTTACCACATATACATATCTCATAATATTTCACATTAGC
*
39527 CATTCGGCTTTACCACATATACATATCTCATACATATTTCACATTAGCCATTCGGCTTTACCACA
66 CATTCGGCTTTACCACATATACATATCTCATACATATTTCACACTAGCCATTCGGCTTTACCACA
39592 TATACATATCTCATACATATTTCACACTAGCCATTCGGCTTTACCACA
131 TATACATATCTCATACATATTTCACACTAGCCATTCGGCTTTACCACA
39640 CATATATATA
Statistics
Matches: 175, Mismatches: 1, Indels: 3
0.98 0.01 0.02
Matches are distributed among these distances:
189 105 0.60
190 21 0.12
191 49 0.28
ACGTcount: A:0.31, C:0.29, G:0.07, T:0.34
Consensus pattern (191 bp):
TACATATTTCACACTAGCCATTCGGCTTTACCACATATACATATCTCATAATATTTCACATTAGC
CATTCGGCTTTACCACATATACATATCTCATACATATTTCACACTAGCCATTCGGCTTTACCACA
TATACATATCTCATACATATTTCACACTAGCCATTCGGCTTTACCACATATACATGCCTCA
Found at i:43135 original size:28 final size:28
Alignment explanation
Indices: 43104--43261 Score: 129
Period size: 28 Copynumber: 5.5 Consensus size: 28
43094 CTGACTGATT
*
43104 TCGCACACATAGCGCTCGATTAAAGAAC
1 TCGCACACATAGTGCTCGATTAAAGAAC
* * *
43132 TCGCACACAATAGTGCCTCAATTACCA-ATC
1 TCGCACAC-ATAGTG-CTCGATTA-AAGAAC
*
43162 TCGCACACATAGTGCTCGATTGAAGAAC
1 TCGCACACATAGTGCTCGATTAAAGAAC
* * ** *
43190 TCGCACACATAGTGCCTCAACTACTGATC
1 TCGCACACATAGTG-CTCGATTAAAGAAC
* * * *
43219 TGGCACACATGGTGCTCGGTTGAAGAAC
1 TCGCACACATAGTGCTCGATTAAAGAAC
* *
43247 TTGCACACACAGTGC
1 TCGCACACATAGTGC
43262 CTCATACCAG
Statistics
Matches: 99, Mismatches: 26, Indels: 10
0.73 0.19 0.07
Matches are distributed among these distances:
27 1 0.01
28 49 0.49
29 31 0.31
30 17 0.17
31 1 0.01
ACGTcount: A:0.30, C:0.29, G:0.19, T:0.22
Consensus pattern (28 bp):
TCGCACACATAGTGCTCGATTAAAGAAC
Found at i:43234 original size:57 final size:57
Alignment explanation
Indices: 43097--43265 Score: 230
Period size: 57 Copynumber: 2.9 Consensus size: 57
43087 GTGCGCACTG
* * * *
43097 ACTGATTTCGCACACATAGCGCTCGATTAAAGAACTCGCACACAATAGTGCCTCAATT
1 ACTGATCTCGCACACATAGTGCTCGATTGAAGAACTCGCACAC-ATAGTGCCTCAACT
**
43155 ACCAATCTCGCACACATAGTGCTCGATTGAAGAACTCGCACACATAGTGCCTCAACT
1 ACTGATCTCGCACACATAGTGCTCGATTGAAGAACTCGCACACATAGTGCCTCAACT
* * * * *
43212 ACTGATCTGGCACACATGGTGCTCGGTTGAAGAACTTGCACACACAGTGCCTCA
1 ACTGATCTCGCACACATAGTGCTCGATTGAAGAACTCGCACACATAGTGCCTCA
43266 TACCAGCATG
Statistics
Matches: 98, Mismatches: 13, Indels: 1
0.88 0.12 0.01
Matches are distributed among these distances:
57 60 0.61
58 38 0.39
ACGTcount: A:0.30, C:0.29, G:0.18, T:0.22
Consensus pattern (57 bp):
ACTGATCTCGCACACATAGTGCTCGATTGAAGAACTCGCACACATAGTGCCTCAACT
Found at i:43365 original size:34 final size:36
Alignment explanation
Indices: 43270--43585 Score: 218
Period size: 38 Copynumber: 8.8 Consensus size: 36
43260 GCCTCATACC
* ** *
43270 AGCATGAATGCCTTCGAGGTTTA-CCCGGATATATCACT
1 AGCACGAATGCCTTCGA-ACTTAGCCC-GATACATCA-T
* *
43308 AGCACGAATGCTTTTTCGGAACTTAGCCCGA-ACATTAT
1 AGCACGAATGC--CTTC-GAACTTAGCCCGATACATCAT
*
43346 AGCA-GAATGCCTTCGAACTTAG-CCGGTACATTC-T
1 AGCACGAATGCCTTCGAACTTAGCCCGATACA-TCAT
43380 AGCACGAATGCTCTTCGGAACTTAGCCCGGATACATCACT
1 AGCACGAATGC-CTTC-GAACTTAGCCC-GATACATCA-T
*
43420 AGCACGAATGCTCTT-GAAC-T-G-CGGATACATC-T
1 AGCACGAATGC-CTTCGAACTTAGCCCGATACATCAT
* *
43452 AGCA-GAA---CTCTCGGACTTAGCCGGATACATCAT
1 AGCACGAATGCCT-TCGAACTTAGCCCGATACATCAT
*
43485 AGCACGAATG-CTTCGAACTTAGCCGGAT-CATCACT
1 AGCACGAATGCCTTCGAACTTAGCCCGATACATCA-T
*
43520 AGCACGAATGCTTTCGGAACTTAGCCCGGATACATCACT
1 AGCACGAATGCCTTC-GAACTTAGCCC-GATACATCA-T
*
43559 AG-A-GAATGCTCTTCGGGACTTAGCCCG
1 AGCACGAATGC-CTTC-GAACTTAGCCCG
43586 GATATATATA
Statistics
Matches: 233, Mismatches: 17, Indels: 57
0.76 0.06 0.19
Matches are distributed among these distances:
27 2 0.01
28 1 0.00
29 3 0.01
30 1 0.00
31 4 0.02
32 15 0.06
33 8 0.03
34 32 0.14
35 37 0.16
36 10 0.04
37 32 0.14
38 41 0.18
39 18 0.08
40 24 0.10
41 5 0.02
ACGTcount: A:0.28, C:0.27, G:0.21, T:0.25
Consensus pattern (36 bp):
AGCACGAATGCCTTCGAACTTAGCCCGATACATCAT
Found at i:43453 original size:72 final size:73
Alignment explanation
Indices: 43306--43589 Score: 305
Period size: 72 Copynumber: 4.0 Consensus size: 73
43296 GGATATATCA
* *
43306 CTAGCACGAATGCTTTTTCGGAACTTAGCCC-GA-ACATTATAGCAGAATGC-CTTCGAACTTAG
1 CTAGCACGAATGC-TCTTCGGAACTTAGCCCGGATACATCATAGCAGAATGCTCTT-GAACTTAG
43368 CCGG-TACATT
64 CCGGATACA-T
43378 CTAGCACGAATGCTCTTCGGAACTTAGCCCGGATACATCACTAGCACGAATGCTCTTGAAC-T-G
1 CTAGCACGAATGCTCTTCGGAACTTAGCCCGGATACATCA-TAGCA-GAATGCTCTTGAACTTAG
43441 -CGGATACAT
64 CCGGATACAT
*
43450 CTAGCA-GAA--CTC-TCGG-ACTTAG-CCGGATACATCATAGCACGAATGCT-TCGAACTTAGC
1 CTAGCACGAATGCTCTTCGGAACTTAGCCCGGATACATCATAGCA-GAATGCTCTTGAACTTAGC
43508 CGGAT-CAT
65 CGGATACAT
*
43516 CACTAGCACGAATGCT-TTCGGAACTTAGCCCGGATACATCACTAG-AGAATGCTCTTCGGGACT
1 --CTAGCACGAATGCTCTTCGGAACTTAGCCCGGATACATCA-TAGCAGAATGCTCTT--GAACT
43579 TAGCCCGGATA
61 TAG-CCGGATA
43590 TATATATACT
Statistics
Matches: 184, Mismatches: 5, Indels: 41
0.80 0.02 0.18
Matches are distributed among these distances:
64 5 0.03
65 14 0.08
66 16 0.09
67 11 0.06
68 10 0.05
69 6 0.03
71 25 0.14
72 38 0.21
73 24 0.13
74 9 0.05
75 17 0.09
76 9 0.05
ACGTcount: A:0.28, C:0.27, G:0.21, T:0.24
Consensus pattern (73 bp):
CTAGCACGAATGCTCTTCGGAACTTAGCCCGGATACATCATAGCAGAATGCTCTTGAACTTAGCC
GGATACAT
Found at i:43510 original size:35 final size:36
Alignment explanation
Indices: 43294--43568 Score: 251
Period size: 34 Copynumber: 7.7 Consensus size: 36
43284 CGAGGTTTAC
*
43294 CCGGATATATCACTAGCACGAATGCTTTTTCGGAACTTAG
1 CCGGATACATCACTAGCACGAATGC---TTC-GAACTTAG
* *
43334 CCCGA-ACATTA-TAGCA-GAATGCCTTCGAACTTAG
1 CCGGATACATCACTAGCACGAATG-CTTCGAACTTAG
*
43368 CCGG-TACAT-TCTAGCACGAATGCTCTTCGGAACTTAG
1 CCGGATACATCACTAGCACGAATG--CTTC-GAACTTAG
*
43405 CCCGGATACATCACTAGCACGAATGCTCTTGAAC-T-G
1 -CCGGATACATCACTAGCACGAATGCT-TCGAACTTAG
*
43441 -CGGATACAT--CTAGCA-GAA--CTCTCGGACTTAG
1 CCGGATACATCACTAGCACGAATGCT-TCGAACTTAG
43472 CCGGATACATCA-TAGCACGAATGCTTCGAACTTAG
1 CCGGATACATCACTAGCACGAATGCTTCGAACTTAG
43507 CCGGAT-CATCACTAGCACGAATGCTTTCGGAACTTAG
1 CCGGATACATCACTAGCACGAATGC-TTC-GAACTTAG
43544 CCCGGATACATCACTAG-A-GAATGCT
1 -CCGGATACATCACTAGCACGAATGCT
43569 CTTCGGGACT
Statistics
Matches: 201, Mismatches: 11, Indels: 50
0.77 0.04 0.19
Matches are distributed among these distances:
29 7 0.03
30 1 0.00
31 4 0.02
32 15 0.07
33 5 0.02
34 37 0.18
35 35 0.17
36 11 0.05
37 28 0.14
38 23 0.11
39 19 0.09
40 16 0.08
ACGTcount: A:0.29, C:0.27, G:0.20, T:0.24
Consensus pattern (36 bp):
CCGGATACATCACTAGCACGAATGCTTCGAACTTAG
Found at i:44865 original size:36 final size:35
Alignment explanation
Indices: 44809--44905 Score: 110
Period size: 36 Copynumber: 2.8 Consensus size: 35
44799 CGAATAGTCC
* *
44809 CCACATGTAGTTACGGGTCTTACCCGGACAAAATCT
1 CCACACGTAGTCACGGGTCTTACCCGGACAAAAT-T
* *
44845 CCACACGTAGTCACGAGTCTTACCC-GACATAATT
1 CCACACGTAGTCACGGGTCTTACCCGGACAAAATT
*
44879 -CACAAC-TAGTCTCGGGTCTTACCCGGA
1 CCAC-ACGTAGTCACGGGTCTTACCCGGA
44906 ATATATTCCA
Statistics
Matches: 53, Mismatches: 6, Indels: 6
0.82 0.09 0.09
Matches are distributed among these distances:
33 19 0.36
34 5 0.09
35 7 0.13
36 22 0.42
ACGTcount: A:0.27, C:0.31, G:0.19, T:0.24
Consensus pattern (35 bp):
CCACACGTAGTCACGGGTCTTACCCGGACAAAATT
Found at i:45070 original size:46 final size:45
Alignment explanation
Indices: 45019--45283 Score: 314
Period size: 46 Copynumber: 5.8 Consensus size: 45
45009 TATCATTCGG
* *
45019 CCACATATACACACATCTCCTACA-A-TTCACACAGCCATTCGCTTTA
1 CCACATAT--ACATATCTCATACATATTTCACACAGCCATTCGC-TTA
*
45065 CCACATATACATATCTCATACATATTTCACATTAGCCATT-GCTTTA
1 CCACATATACATATCTCATACATATTTCACA-CAGCCATTCGC-TTA
45111 CCACATATACATATCTCATACATATTTCACACTAGCCATTCGCTTA
1 CCACATATACATATCTCATACATATTTCACAC-AGCCATTCGCTTA
*
45157 CCACATATAC-TATCTCATACA-ATTTCAC-TAGCCATTCGGCTTA
1 CCACATATACATATCTCATACATATTTCACACAGCCATTC-GCTTA
* *
45200 CCACATAT-CATATCTCAATA-TTATTTCACATTAGCCATTCGGCTTA
1 CCACATATACATATCTC-ATACATATTTCACA-CAGCCATTC-GCTTA
45246 CCACATATACATATCTCATACATA-TTCACACTAGCCAT
1 CCACATATACATATCTCATACATATTTCACAC-AGCCAT
45284 CGGTTTACCA
Statistics
Matches: 197, Mismatches: 8, Indels: 28
0.85 0.03 0.12
Matches are distributed among these distances:
42 9 0.05
43 19 0.10
44 29 0.15
45 12 0.06
46 109 0.55
47 19 0.10
ACGTcount: A:0.32, C:0.30, G:0.05, T:0.32
Consensus pattern (45 bp):
CCACATATACATATCTCATACATATTTCACACAGCCATTCGCTTA
Found at i:45247 original size:135 final size:134
Alignment explanation
Indices: 45033--45283 Score: 386
Period size: 135 Copynumber: 1.9 Consensus size: 134
45023 ATATACACAC
*
45033 ATCTCCTACAATTCACACAGCCATTCGCTTTACCACATATACATATCTCATACATATTTCACATT
1 ATCTCATACAATTCACACAGCCATTCGCTTTACCACATATACATATCTCATACATATTTCACATT
45098 AGCCATTGCTTTACCACATATACATATCTCATACATATTTCACACTAGCCATTCGCTTACCACAT
66 AGCCATTGCTTTACCACATATACATATCTCATACATA-TTCACACTAGCCATTCGCTTACCACAT
45163 ATACT
130 ATACT
* *
45168 ATCTCATACAATTTCAC-TAGCCATTCGGC-TTACCACATAT-CATATCTCAATA-TTATTTCAC
1 ATCTCATACAA-TTCACACAGCCATTC-GCTTTACCACATATACATATCTC-ATACATATTTCAC
45229 ATTAGCCATTCGGC-TTACCACATATACATATCTCATACATATTCACACTAGCCAT
63 ATTAGCCATT--GCTTTACCACATATACATATCTCATACATATTCACACTAGCCAT
45284 CGGTTTACCA
Statistics
Matches: 108, Mismatches: 3, Indels: 11
0.89 0.02 0.09
Matches are distributed among these distances:
134 40 0.37
135 59 0.55
136 9 0.08
ACGTcount: A:0.32, C:0.29, G:0.05, T:0.33
Consensus pattern (134 bp):
ATCTCATACAATTCACACAGCCATTCGCTTTACCACATATACATATCTCATACATATTTCACATT
AGCCATTGCTTTACCACATATACATATCTCATACATATTCACACTAGCCATTCGCTTACCACATA
TACT
Done.