Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2562
Parameters: 2 7 7 80 10 50 1000
Length:  45394

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4657--4789
38
3.5
38
92
2
223
20
24
26
28
1.99
4794--4943
43
3.5
43
87
1
221
14
25
29
30
1.95
9816--10036
38
5.8
38
89
1
318
19
21
27
31
1.97
9816--10036
113
1.9
114
89
0
345
19
21
27
31
1.97
9816--10036
75
2.9
76
87
1
318
19
21
27
31
1.97
10029--10183
43
3.6
43
90
0
247
12
23
32
30
1.92
11805--12025
38
5.8
38
89
1
327
20
22
26
30
1.98
11807--12025
75
2.9
76
89
1
332
21
21
26
31
1.98
11805--12020
113
1.9
114
89
2
337
21
22
25
31
1.98
12018--12172
43
3.6
43
92
0
265
11
25
32
30
1.91
16473--16844
48
7.8
48
82
3
437
26
16
28
28
1.97
22785--22832
25
1.9
25
86
0
69
35
22
14
27
1.93
22868--22914
20
2.3
20
92
7
78
36
10
19
34
1.86
22962--23043
24
3.4
24
83
5
103
30
19
21
28
1.98
32871--33046
46
3.8
47
79
12
202
20
20
29
29
1.98
32868--33039
93
1.8
93
92
2
292
20
20
29
28
1.98
40393--40564
46
3.8
45
74
17
167
20
19
30
29
1.97
40389--40557
92
1.8
91
88
6
261
20
19
30
28
1.97

Tables:   1

The End!