Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1817
Parameters: 2 7 7 80 10 50 1000
Length:  43967

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
822--1078
38
6.5
38
81
13
265
25
26
21
26
2.00
2450--4187
47
35.9
47
80
13
1911
29
29
8
32
1.87
3387--3501
62
1.9
61
89
7
180
29
27
10
32
1.90
2503--4188
241
6.9
244
83
13
1957
29
29
8
32
1.87
3336--3550
108
2.0
111
90
6
350
29
27
9
33
1.88
10042--10073
14
2.4
13
90
10
55
62
12
6
18
1.50
14423--14584
40
4.1
40
89
0
243
25
22
25
26
2.00
14745--14795
25
2.0
25
81
7
59
33
13
31
21
1.92
16161--16224
31
2.1
31
84
0
83
25
20
15
39
1.92
16442--16534
47
2.0
47
91
0
150
29
19
23
27
1.98
16431--16536
24
4.4
24
89
3
151
27
19
22
30
1.98
16593--16649
9
5.9
9
73
15
51
35
21
8
35
1.84
16581--16651
20
3.5
20
94
0
124
32
21
11
35
1.89
16586--16640
11
5.4
11
70
16
55
30
20
12
36
1.90
16687--16734
25
2.0
24
83
4
60
25
18
25
31
1.98
30174--30202
14
2.0
15
93
6
51
51
20
0
27
1.47
31565--31642
32
2.4
32
95
0
138
19
29
29
21
1.98

Tables:   1

The End!