Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1507
Parameters: 2 7 7 80 10 50 1000
Length:  42256

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
505--563
16
3.4
17
74
9
57
76
3
16
3
1.06
512--568
16
3.5
16
84
11
71
77
1
17
3
1.00
512--568
12
5.2
11
74
14
55
77
1
17
3
1.00
619--648
11
2.6
12
89
10
53
43
13
16
26
1.85
623--650
11
2.5
11
100
0
56
42
17
17
21
1.89
2819--2915
30
3.2
30
75
2
106
27
26
16
28
1.97
7568--7607
14
2.9
14
88
0
53
50
7
32
10
1.64
10510--10562
23
2.4
22
76
20
56
9
18
1
69
1.25
15346--15378
12
2.8
12
86
4
50
51
9
3
36
1.49
15410--15448
20
1.9
21
89
5
62
35
23
20
20
1.96
17745--17894
26
5.8
26
95
0
255
39
17
14
29
1.88
19658--19751
30
3.2
30
93
1
163
34
23
18
24
1.96
23853--23908
12
4.7
12
74
14
53
64
0
23
12
1.27
25701--25728
4
7.0
4
100
0
56
25
0
0
75
0.81
31221--31269
11
4.5
11
92
2
82
10
0
6
83
0.80
40160--41024
431
2.0
431
97
1
1628
26
15
19
39
1.91
41261--41298
6
6.5
6
87
6
51
18
0
0
81
0.69
41261--41299
20
1.9
21
89
5
62
20
0
0
79
0.73

Tables:   1

The End!