Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3543
Parameters: 2 7 7 80 10 50 1000
Length:  42107

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6273--6306
12
2.8
12
90
4
50
64
0
23
11
1.26
7675--7707
6
5.3
6
92
7
57
18
0
0
81
0.68
7675--7707
13
2.7
12
90
9
57
18
0
0
81
0.68
16097--16151
20
2.8
20
88
0
83
29
16
29
25
1.97
22621--22656
17
2.1
17
100
0
72
58
5
5
30
1.44
23544--23600
18
3.2
17
71
11
51
10
24
1
63
1.36
25418--25472
20
2.8
20
82
0
74
23
29
18
29
1.98
25543--25577
13
2.7
13
90
0
52
45
0
11
42
1.40
25801--25862
23
2.7
23
87
5
81
25
11
19
43
1.84
28187--28238
23
2.3
22
75
21
54
9
23
1
65
1.32
33674--33718
16
2.8
16
82
0
54
80
2
6
11
0.99
34103--34148
10
4.5
10
78
5
56
15
19
21
43
1.87
34100--34148
21
2.4
20
86
3
62
14
18
22
44
1.85

Tables:   1

The End!