Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3496
Parameters: 2 7 7 80 10 50 1000
Length:  41009

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2809--2910
29
3.6
29
74
5
100
28
34
18
18
1.95
2754--2940
57
3.3
55
86
4
230
29
33
17
19
1.94
4785--4854
26
2.6
27
84
9
88
30
28
11
30
1.92
9213--9360
67
2.2
67
83
8
176
33
17
27
21
1.96
13620--13769
67
2.2
67
81
8
171
32
17
28
21
1.96
13644--13827
67
2.8
64
77
8
194
29
17
29
22
1.97
31923--32088
47
3.5
46
73
16
137
30
19
29
20
1.97
36490--36514
1
25.0
1
100
0
50
0
0
100
0
0.00
40877--41001
44
2.9
44
82
9
141
24
18
23
34
1.96

Tables:   1

The End!