Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3626
Parameters: 2 7 7 80 10 50 1000
Length:  49303

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2487--2532
22
2.0
23
87
4
67
28
30
8
32
1.87
2709--2930
40
5.6
40
84
3
243
25
28
22
23
1.99
2741--2892
79
1.9
80
87
1
225
25
26
23
24
2.00
2696--2930
119
2.0
120
81
4
278
25
28
22
23
1.99
2750--2930
79
2.3
79
83
4
222
24
27
23
24
2.00
3233--3311
29
2.7
29
86
5
106
27
32
15
24
1.95
3293--3395
43
2.4
43
98
0
197
26
36
15
21
1.93
5238--5315
36
2.1
37
90
2
122
25
30
19
24
1.98
5433--5974
47
11.4
47
91
3
757
28
29
9
32
1.88
10060--10197
40
3.5
40
92
1
224
23
23
28
24
2.00
18154--18329
40
4.4
40
91
3
259
23
21
28
26
1.99
27169--27428
47
5.6
47
78
11
209
28
18
28
23
1.98
29779--29931
43
3.6
43
92
4
251
22
22
29
26
1.99
31302--31479
40
4.5
40
91
2
270
25
28
23
23
2.00
35832--36020
40
4.7
40
97
0
360
24
26
23
24
2.00
35809--36020
80
2.7
80
94
2
365
25
26
23
25
2.00
39325--39487
40
4.1
40
90
3
231
23
28
26
21
1.99
39541--39575
13
2.7
13
83
16
54
45
11
2
40
1.55
46449--46659
38
5.5
40
89
7
305
24
27
22
24
2.00

Tables:   1

The End!