Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2314
Parameters: 2 7 7 80 10 50 1000
Length:  37079

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2482--2653
93
1.8
93
96
0
317
27
29
21
20
1.98
2475--2650
46
3.8
46
79
12
216
28
29
21
20
1.98
10030--10159
47
2.8
48
79
13
155
30
29
19
20
1.97
10038--10178
46
3.0
44
75
14
126
29
29
19
21
1.98
12165--12215
25
2.1
24
85
10
68
54
13
9
21
1.67
17061--17135
26
2.9
26
80
2
80
33
17
8
41
1.78
17098--17148
26
1.9
26
88
4
75
29
19
9
41
1.84
17306--17330
12
2.1
12
100
0
50
16
24
0
60
1.36
19381--19432
26
2.1
26
89
7
81
32
7
5
53
1.53
23665--23785
34
3.5
34
82
2
134
29
21
18
30
1.97
23695--23789
35
2.7
35
86
1
129
30
20
15
33
1.94
23775--23833
18
3.3
18
79
9
75
38
16
20
23
1.92
24230--24302
27
2.7
27
93
0
119
38
16
13
31
1.88
25137--25165
12
2.3
13
94
5
51
75
0
0
24
0.80
26518--26570
23
2.4
22
76
20
56
9
18
1
69
1.25
29102--29370
27
10.0
27
88
0
387
37
17
14
31
1.89
31146--31368
40
5.6
39
80
7
216
25
21
27
25
1.99
31226--31403
79
2.2
80
82
3
200
25
21
28
24
1.99

Tables:   1

The End!