Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2949
Parameters: 2 7 7 80 10 50 1000
Length:  48686

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1651--1795
40
3.6
40
85
4
193
25
24
26
23
2.00
9654--9798
40
3.6
40
85
4
193
25
24
26
23
2.00
12516--12550
13
2.7
13
95
0
61
2
34
31
31
1.73
15879--15921
21
2.0
21
82
8
52
20
18
16
44
1.87
26875--26942
29
2.3
29
82
5
84
27
29
13
29
1.94
26764--27091
174
1.9
174
98
0
638
31
24
14
30
1.94
27051--27122
29
2.5
30
82
13
96
30
29
12
27
1.93
28714--28783
25
2.8
25
91
0
104
25
22
17
34
1.96
29965--29999
13
2.7
13
95
0
61
17
40
42
0
1.49
36596--36818
39
5.7
40
83
8
248
26
22
26
24
2.00
36596--36817
79
2.8
82
82
8
264
26
22
26
24
2.00
36596--36851
79
3.3
79
80
10
208
27
21
26
24
1.99
44548--44798
37
6.6
38
83
12
254
26
21
27
24
1.99
44596--44798
37
5.3
38
86
8
256
26
22
27
24
2.00
44544--44798
76
3.3
79
81
14
277
26
22
27
24
2.00
44546--44796
114
2.2
115
82
12
304
26
22
27
23
2.00
47499--47543
14
3.2
13
84
15
54
2
13
0
84
0.72
47499--47540
19
2.3
19
88
12
61
2
11
0
85
0.68
47499--47540
20
2.2
19
84
16
52
2
11
0
85
0.68
47499--47540
21
2.0
20
86
4
57
2
11
0
85
0.68
47500--47543
17
2.5
19
85
10
58
2
13
0
84
0.73
47582--47620
11
3.4
11
89
7
51
12
2
0
84
0.72
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47585--47623
14
2.9
14
85
11
55
15
2
0
82
0.79
47762--47795
16
2.1
16
88
0
50
17
0
8
73
1.08
48061--48108
12
3.9
12
75
24
55
10
0
8
81
0.88
48054--48144
28
3.3
27
74
8
78
8
4
8
78
1.09

Tables:   1

The End!