Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3728
Parameters: 2 7 7 80 10 50 1000
Length:  104474

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5353--5394
22
1.9
22
85
9
59
21
2
26
50
1.61
18665--18780
46
2.5
46
87
0
169
23
20
25
30
1.99
32438--32695
40
6.5
40
89
2
360
25
27
22
23
2.00
35978--36028
25
2.0
25
100
0
102
29
11
7
50
1.67
38501--38860
46
7.8
46
76
10
322
23
19
27
29
1.98
38547--38714
47
3.6
47
75
13
193
22
19
29
28
1.98
38496--38853
93
3.9
93
86
5
467
23
19
27
29
1.98
44996--45080
27
3.1
27
65
18
68
25
22
25
25
2.00
46599--46639
21
2.0
20
86
13
57
19
4
9
65
1.40
65425--65474
15
3.4
15
86
2
66
10
18
12
60
1.59
84115--84215
37
2.7
37
95
0
175
22
32
20
23
1.98
84358--84542
48
3.9
48
94
0
334
30
29
6
32
1.83
88185--88462
94
3.0
94
93
1
488
39
19
10
30
1.85
95599--95659
24
2.5
24
86
5
79
34
31
14
19
1.92
95688--95969
94
3.0
94
93
0
483
40
18
10
30
1.84
98485--98765
40
7.0
40
92
3
415
25
28
23
22
1.99
99998--100036
5
7.8
5
83
11
53
0
17
0
82
0.68

Tables:   1

The End!