Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold148_ERROPOS9177376
Parameters: 2 7 7 80 10 50 1000
Length:  99999

Tables:   1   

This is table  1  of  1  ( 47 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
277--512
119
2.0
119
84
8
311
22
14
13
48
1.79
847--1062
105
2.1
105
90
0
342
29
14
10
45
1.79
8024--8174
33
4.5
33
81
1
167
39
33
9
18
1.83
8024--8174
66
2.3
66
84
2
203
39
33
9
18
1.83
11674--11802
46
2.8
46
92
0
204
29
27
21
20
1.98
20053--20096
16
2.9
14
84
15
61
40
0
0
59
0.98
20165--20241
38
2.0
41
89
7
124
54
7
1
36
1.38
20343--20387
18
2.5
18
85
7
65
44
2
2
51
1.26
22869--22912
23
1.9
23
100
0
88
36
0
2
61
1.09
26825--26875
25
2.0
25
96
0
93
25
33
7
33
1.85
29559--29693
33
4.3
33
75
14
124
30
22
12
34
1.91
29565--29679
58
1.9
60
82
5
144
33
20
14
31
1.93
29686--29754
29
2.4
29
92
0
111
24
28
10
36
1.88
30546--30586
20
2.0
21
85
4
57
36
12
0
51
1.40
30551--30593
20
2.2
20
82
0
50
39
13
0
46
1.44
31925--32101
39
4.5
39
84
1
221
43
20
5
29
1.75
33479--33518
21
1.9
21
84
0
53
47
12
15
25
1.80
38470--38501
13
2.5
13
94
0
55
87
0
12
0
0.54
47303--47332
14
2.1
14
93
0
51
40
16
13
30
1.87
50570--50610
10
4.0
10
90
3
55
29
0
9
60
1.28
51898--51989
46
2.0
46
97
0
175
40
13
22
23
1.89
52332--52365
3
11.0
3
93
6
59
32
2
0
64
1.08
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
52724--52793
20
3.5
20
92
0
113
21
35
28
14
1.92
54765--55106
170
2.0
170
99
0
675
36
14
14
34
1.87
60260--60284
3
8.3
3
100
0
50
36
0
0
64
0.94
68589--68835
50
4.8
50
84
6
293
20
29
23
26
1.99
68588--68835
99
2.4
103
86
7
337
20
29
23
26
1.99
68929--68960
13
2.5
13
94
0
55
56
12
0
31
1.37
76286--76345
31
1.9
31
86
6
86
30
25
3
41
1.71
81645--81689
19
2.3
20
84
3
65
66
6
0
26
1.16
83657--83713
22
2.6
22
71
13
55
42
3
1
52
1.28
83649--83707
25
2.3
27
82
5
68
40
3
1
54
1.27
85232--85295
32
2.0
31
85
8
85
42
4
25
28
1.75
85503--85534
13
2.5
13
94
0
55
31
0
12
56
1.37
85629--85875
50
4.8
50
81
9
261
26
23
28
20
1.99
85633--85876
100
2.4
102
84
9
311
26
24
28
21
1.99
92948--92974
13
2.1
13
100
0
54
29
0
7
62
1.22
93077--93325
105
2.4
97
81
12
261
26
24
28
20
1.99
93077--93317
50
4.7
49
82
9
261
26
24
29
19
1.99
95231--95309
23
3.5
22
72
16
72
72
0
27
0
0.85
95234--95296
33
1.9
33
84
15
87
69
0
30
0
0.88
95235--95310
24
3.3
24
73
12
79
73
0
26
0
0.83
95235--95314
6
13.2
6
74
11
65
75
0
25
0
0.81
95615--95645
13
2.4
13
94
0
53
87
0
12
0
0.55
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
96189--96229
15
2.6
17
81
14
52
21
14
12
51
1.75
96252--96304
17
2.9
18
76
18
65
43
7
7
41
1.61
96252--96303
19
3.0
16
81
13
59
44
7
7
40
1.62

Tables:   1

The End!