Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3600
Parameters: 2 7 7 80 10 50 1000
Length:  73429

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7839--7869
16
1.9
16
93
0
53
16
12
6
64
1.47
7777--7944
89
1.9
90
89
1
266
26
16
19
37
1.93
7872--8317
75
5.8
75
75
15
375
28
17
22
30
1.97
8006--8170
89
1.9
89
89
5
262
30
16
20
31
1.95
8112--8314
69
2.9
70
80
11
243
26
18
24
30
1.98
8309--8341
15
2.2
15
94
0
57
21
6
6
66
1.35
8256--8467
88
2.4
87
85
6
268
29
16
20
32
1.95
15125--15195
35
2.0
35
86
0
97
26
7
14
52
1.67
20750--20815
24
2.8
24
86
6
100
37
0
18
43
1.50
20750--20815
22
2.8
24
84
9
91
37
0
18
43
1.50
25686--25730
22
2.1
21
88
8
65
44
24
0
31
1.54
26237--26279
22
2.0
21
86
13
61
51
0
0
48
1.00
26310--26357
21
2.3
21
79
13
55
66
6
22
4
1.32
27229--27262
6
5.7
6
89
0
50
17
17
14
50
1.79
27235--27273
18
2.2
18
90
0
60
23
12
10
53
1.69
32254--32301
5
10.0
5
78
17
57
56
0
0
43
0.99
32254--32301
24
2.0
24
87
4
69
56
0
0
43
0.99
32305--32338
17
1.9
17
88
5
50
79
2
8
8
1.03
32315--32386
21
3.4
20
72
12
56
73
2
18
5
1.15
32658--32701
22
2.0
22
95
0
79
29
0
29
40
1.57
33255--33305
6
8.5
6
84
0
66
21
17
11
49
1.79
33261--33305
18
2.5
18
92
0
81
22
15
11
51
1.75
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35653--35688
15
2.5
14
86
8
54
66
0
0
33
0.92
36035--36081
22
2.2
22
92
3
78
36
6
0
57
1.24
36135--36172
15
2.5
16
83
12
53
28
0
2
68
1.03
36162--36221
21
2.7
21
80
12
59
16
6
5
71
1.25
38582--38630
26
2.0
26
88
8
75
30
0
6
63
1.19
48638--48675
20
1.9
20
89
10
60
60
13
15
10
1.59
56516--56559
22
2.0
22
86
0
61
52
0
0
47
1.00
58730--58786
15
3.5
15
73
17
60
50
0
0
49
1.00
61747--61821
3
25.3
3
76
8
73
61
4
2
32
1.28
61833--61920
29
3.0
29
77
9
90
61
6
14
17
1.54
63375--63754
44
8.8
43
70
13
219
28
22
17
31
1.96
63344--63756
129
3.2
129
94
0
720
29
22
18
30
1.97

Tables:   1

The End!