Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2395
Parameters: 2 7 7 80 10 50 1000
Length:  60224

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2034--2224
42
4.7
40
76
12
174
26
20
27
25
1.99
10008--10238
40
5.8
40
85
3
288
24
21
28
25
1.99
10008--10258
120
2.1
119
91
2
407
23
20
28
27
1.99
10008--10238
80
2.9
80
88
1
331
24
21
28
25
1.99
18020--18250
40
5.8
41
85
4
294
24
21
28
25
1.99
20753--20805
26
2.0
26
100
0
106
35
26
3
33
1.75
21071--21203
46
2.9
45
76
16
132
21
29
20
28
1.98
21176--21298
45
2.7
45
86
7
142
25
26
17
30
1.97
21204--21298
45
2.1
45
92
0
154
25
24
18
31
1.98
25907--26028
43
2.9
41
78
7
118
31
16
25
26
1.96
27606--27927
48
6.7
48
77
5
265
27
27
17
28
1.97
27606--27937
96
3.5
95
81
2
315
27
27
17
28
1.97
27669--27937
95
2.8
95
80
1
261
29
27
15
27
1.96
27606--27937
143
2.3
144
81
2
380
27
27
17
28
1.97
35360--35576
48
4.5
48
85
0
299
29
26
15
29
1.96
45335--45511
40
4.4
40
81
4
216
24
20
27
27
1.99
52390--52514
40
3.2
40
82
5
155
23
22
27
27
1.99
52742--52783
22
1.9
22
85
9
59
33
9
14
42
1.78

Tables:   1

The End!