Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3250
Parameters: 2 7 7 80 10 50 1000
Length:  59314

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
766--1188
78
5.5
73
73
18
342
34
21
15
29
1.93
1030--1170
75
1.9
71
85
8
194
39
24
14
21
1.91
1325--1656
75
4.5
73
87
6
458
32
20
15
31
1.94
1324--1672
145
2.4
145
86
6
485
34
20
15
30
1.93
1672--1843
70
2.5
68
84
5
204
33
22
15
29
1.94
10134--10228
24
4.2
24
71
22
80
66
2
2
29
1.15
10134--10193
8
7.5
8
85
7
68
65
3
1
30
1.19
10344--10406
22
2.7
23
85
11
76
52
4
7
34
1.52
10427--10560
25
5.6
25
70
15
86
58
2
4
35
1.31
10375--10495
27
4.6
27
71
11
97
56
3
7
33
1.44
11044--11158
30
3.8
30
92
0
194
21
3
49
25
1.65
12528--12581
26
2.1
26
82
6
65
61
3
0
35
1.14
18468--18534
30
2.1
31
83
13
82
41
0
2
55
1.15
23771--23804
5
6.8
5
96
0
50
67
0
11
20
1.21
36722--36868
42
3.3
42
83
8
179
28
28
13
29
1.94
36740--36911
49
3.7
48
85
8
200
29
27
13
28
1.95
36749--36954
47
4.5
46
83
6
195
30
27
14
27
1.95
36791--36978
95
2.0
92
79
8
200
30
27
14
27
1.95
36987--37135
31
4.8
31
91
0
226
25
26
20
28
1.99
39588--39695
26
4.2
26
92
2
164
34
7
22
36
1.82
45907--46014
26
4.2
26
91
0
180
32
6
24
37
1.81
47602--47717
54
2.1
54
100
0
232
46
35
5
12
1.65
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48162--48193
8
4.1
8
92
8
57
87
0
0
12
0.54
48162--48190
15
1.9
15
100
0
58
89
0
0
10
0.48
48940--48988
18
2.8
18
79
14
66
34
8
0
57
1.29
48924--48988
35
1.9
35
84
12
91
35
7
0
56
1.28

Tables:   1

The End!