Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2453
Parameters: 2 7 7 80 10 50 1000
Length:  58370

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
589--744
27
5.7
26
79
7
134
27
16
28
28
1.97
589--744
82
1.9
81
82
3
197
27
16
28
28
1.97
6562--6766
27
7.6
27
83
3
223
26
15
29
29
1.96
6563--6766
54
3.8
54
84
3
257
25
15
29
29
1.96
10985--11056
33
2.4
30
88
11
103
33
25
15
26
1.95
11699--11738
19
2.1
19
86
9
55
25
42
25
7
1.80
14190--14316
29
4.5
28
88
3
173
33
25
12
29
1.92
14190--14316
57
2.2
57
88
2
184
33
25
12
29
1.92
17487--18220
374
2.0
374
97
0
1396
29
30
14
25
1.95
22279--22354
33
2.5
30
87
10
102
28
23
18
28
1.98
25411--25436
13
2.0
13
100
0
52
30
0
15
53
1.42
28581--28618
17
2.3
17
81
4
51
76
0
0
23
0.79
30993--31027
18
1.9
18
94
0
61
51
8
34
5
1.56
33616--33667
25
2.1
25
85
3
70
28
17
21
32
1.96
33714--33752
10
3.8
10
93
6
69
30
17
17
33
1.94
33714--33753
21
1.9
21
100
0
80
30
17
17
35
1.93
41519--41574
25
2.2
25
87
6
78
25
21
21
32
1.98
41494--41574
25
3.2
24
80
7
72
25
20
20
32
1.98
45721--45912
49
3.9
49
83
3
242
28
18
25
27
1.98
45714--45909
100
2.0
100
90
5
315
27
18
25
28
1.98
49094--49264
93
1.8
93
92
0
288
21
21
28
28
1.99
49098--49269
46
3.7
46
77
13
190
22
21
27
28
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
56666--56834
46
3.7
46
75
14
177
21
21
28
28
1.99
56663--56832
93
1.8
92
91
1
277
21
21
28
28
1.99

Tables:   1

The End!