Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2889
Parameters: 2 7 7 80 10 50 1000
Length:  57356

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8444--8567
46
2.7
46
92
1
196
20
23
27
28
1.99
16917--16947
13
2.4
13
94
0
53
29
22
3
45
1.68
19786--19819
3
11.3
3
100
0
68
32
0
0
67
0.91
20579--20632
27
2.0
27
92
0
90
50
9
12
27
1.71
21682--21781
18
5.6
18
78
7
78
34
14
17
35
1.89
21682--21783
36
2.8
36
77
5
116
33
13
16
36
1.88
21751--21793
18
2.4
18
84
0
59
37
11
11
39
1.78
26604--26649
20
2.3
21
81
11
69
30
4
26
39
1.75
27405--27469
2
32.5
2
75
14
55
49
1
4
44
1.32
35925--35954
6
5.0
6
100
0
60
16
33
16
33
1.92
39568--39732
27
6.1
26
88
6
213
35
23
24
15
1.94
39568--39732
54
3.1
54
92
1
260
35
23
24
15
1.94
39568--39732
81
2.0
81
87
4
235
35
23
24
15
1.94
41316--41423
26
4.2
26
95
0
198
37
26
5
30
1.79
43492--43547
9
6.0
9
76
13
51
51
5
0
42
1.24
45990--46087
27
3.5
28
90
2
135
26
13
28
31
1.94
46018--46100
27
3.0
27
87
5
96
30
12
25
32
1.92
45990--46101
28
4.0
27
83
6
98
28
12
25
33
1.92
53141--53263
46
2.7
45
87
5
160
21
22
27
28
1.99

Tables:   1

The End!