Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3036
Parameters: 2 7 7 80 10 50 1000
Length:  54167

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
126--222
30
3.2
30
75
2
106
27
26
16
28
1.97
2166--2194
13
2.2
13
100
0
58
62
10
0
27
1.28
7426--7490
20
3.3
19
73
16
51
38
16
21
23
1.93
9263--9325
33
1.9
33
84
12
85
12
26
6
53
1.62
9323--9378
21
2.7
21
72
5
51
8
17
1
71
1.21
9322--9378
14
4.1
14
75
16
57
8
17
1
71
1.19
9385--9442
18
3.3
18
80
4
73
5
15
6
72
1.24
9412--9446
11
3.2
11
91
0
52
0
14
5
80
0.89
9340--9446
6
17.7
6
69
7
65
6
18
3
71
1.24
10821--10872
27
1.9
27
84
0
68
65
1
25
7
1.30
18840--18898
28
2.1
28
100
0
118
18
38
10
32
1.84
21733--21825
30
3.2
30
72
8
79
25
17
29
27
1.97
23928--24010
30
2.7
30
81
9
89
12
21
1
65
1.33
24083--24141
25
2.4
24
81
13
66
5
16
3
74
1.13
35470--35507
19
2.0
19
100
0
76
21
21
21
36
1.95
37844--37883
18
2.2
18
86
4
53
12
27
0
60
1.33
38929--38976
14
3.5
14
97
2
89
18
10
0
70
1.15
39022--39077
12
4.8
12
88
4
87
10
1
8
78
1.03
39022--39077
23
2.4
23
93
3
94
10
1
8
78
1.03
41551--41585
15
2.2
16
90
5
54
8
22
5
62
1.45
47539--47578
18
2.2
18
86
4
53
12
27
0
60
1.33
48627--48676
12
3.9
13
89
10
77
24
12
0
64
1.27
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48627--48672
13
3.4
14
91
8
78
19
10
0
69
1.17
48714--48765
13
4.1
13
87
5
79
15
1
9
73
1.18
48717--48762
12
3.8
12
94
2
74
10
2
8
78
1.05
48714--48762
25
2.0
25
91
0
80
14
2
8
75
1.12
48834--48964
65
2.0
66
92
1
219
23
12
25
38
1.90
52468--52529
10
5.9
11
90
5
94
16
6
9
67
1.39
52472--52528
11
5.6
10
85
6
71
14
7
8
70
1.33
52467--52530
21
3.0
21
86
6
94
15
6
9
68
1.36

Tables:   1

The End!