Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1184
Parameters: 2 7 7 80 10 50 1000
Length:  53496

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5219--5780
47
11.6
47
89
6
818
29
29
8
33
1.86
5337--5780
96
4.6
96
94
2
793
29
28
8
33
1.86
10804--10895
40
2.3
40
83
7
109
14
13
34
38
1.84
21680--21774
40
2.4
39
85
3
120
12
11
37
37
1.80
25567--25625
29
2.0
29
93
0
100
47
0
22
30
1.51
27202--27234
18
1.9
17
88
11
50
21
15
9
54
1.68
28457--28551
43
2.2
43
83
7
113
27
16
24
31
1.97
28572--28617
22
2.1
22
100
0
92
43
17
10
28
1.82
29964--29999
18
2.0
18
100
0
72
55
0
16
27
1.42
31953--32054
27
3.8
27
85
5
134
18
25
21
34
1.96
32185--32241
19
3.4
19
64
31
56
19
17
15
47
1.83
32185--32285
31
3.3
31
90
0
148
19
17
14
47
1.82
32197--32296
6
16.3
6
74
12
78
21
18
13
48
1.81
33055--33184
49
2.7
49
90
0
206
25
16
20
37
1.93
33856--33921
33
2.0
33
96
0
123
33
10
9
46
1.70
39588--40272
47
14.6
47
96
0
1199
31
8
30
29
1.87
40144--40222
25
3.3
25
64
16
67
35
5
27
31
1.79

Tables:   1

The End!