Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1472
Parameters: 2 7 7 80 10 50 1000
Length:  52885

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6997--7181
79
2.3
82
84
7
238
25
27
22
24
2.00
6978--7181
40
5.1
40
82
8
238
25
27
22
25
2.00
14765--14982
79
2.7
79
82
8
239
26
26
21
26
1.99
14798--14982
40
4.7
40
80
7
216
26
27
21
24
1.99
20991--21376
193
2.0
194
95
1
695
37
16
13
31
1.89
30281--30335
25
2.2
25
100
0
110
47
14
20
18
1.83
33858--34104
40
6.2
40
79
12
244
23
23
28
25
1.99
33898--34104
79
2.6
79
85
3
274
23
23
28
25
2.00
35805--35874
27
2.6
26
95
2
95
31
28
12
27
1.93
35805--35902
28
3.5
28
90
2
135
31
28
13
26
1.94
36329--36354
12
2.2
12
100
0
52
42
0
7
50
1.31
43840--43935
39
2.5
39
92
0
156
13
26
23
36
1.92
51388--51559
46
3.8
45
80
11
215
21
21
27
29
1.99
51385--51554
92
1.8
92
96
0
313
21
21
28
28
1.99

Tables:   1

The End!