Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1263
Parameters: 2 7 7 80 10 50 1000
Length:  52437

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7341--7564
39
5.7
40
85
7
255
24
22
28
24
2.00
7342--7564
40
5.6
40
85
7
235
24
22
28
24
2.00
7394--7597
79
2.6
79
84
5
218
25
21
27
24
1.99
12920--13124
27
7.6
27
85
3
250
27
15
27
30
1.96
12921--13124
109
1.9
108
88
3
311
26
15
27
30
1.96
19452--19676
40
5.6
40
83
2
247
23
27
24
25
2.00
27220--27379
43
3.7
43
75
8
130
31
26
18
23
1.97
33706--33843
43
3.2
44
79
7
140
32
25
16
25
1.96
33706--33854
42
3.5
43
79
8
160
31
24
16
26
1.97
34525--34569
23
1.9
24
86
4
65
53
22
2
22
1.57
36662--36740
25
3.2
25
82
13
108
32
21
20
25
1.97
36671--36751
25
3.2
25
85
13
121
35
17
19
27
1.94
38573--38793
79
2.8
79
83
9
281
25
28
21
24
1.99
38573--38795
40
5.7
40
84
8
278
25
27
21
24
1.99
50538--50758
39
5.6
39
83
6
234
24
21
28
25
1.99

Tables:   1

The End!