Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold425
Parameters: 2 7 7 80 10 50 1000
Length:  49850

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10342--10376
9
3.8
9
88
3
52
85
2
8
2
0.79
10327--10385
21
2.7
21
82
12
66
76
3
15
5
1.10
13204--13252
20
2.4
21
83
10
66
30
34
12
22
1.91
20390--20555
56
3.0
55
86
2
242
32
23
15
28
1.95
24464--24521
20
2.8
20
89
2
80
15
27
22
34
1.94
24464--24526
10
6.2
10
78
10
56
15
26
20
36
1.93
28897--28939
11
3.9
11
85
14
54
81
0
13
4
0.84
28897--28985
22
4.2
21
72
13
67
76
3
14
5
1.10
31936--31993
21
2.8
20
86
2
71
15
25
22
36
1.94
33243--33305
21
3.0
21
88
2
90
30
3
33
33
1.74
36242--36304
22
2.9
22
79
9
74
31
22
26
19
1.97
36447--36563
41
2.8
41
90
1
180
26
27
23
23
2.00
36825--37228
27
15.0
27
79
6
302
31
8
18
40
1.82
36827--36977
55
2.8
53
83
6
169
31
11
17
39
1.85
37212--37280
27
2.6
26
81
4
93
26
14
20
39
1.91
37083--37232
80
1.9
80
84
4
187
33
9
16
40
1.81
47717--47750
12
2.8
12
90
4
50
64
0
23
11
1.26

Tables:   1

The End!